Protein Concepts Dictionary

Tableau information

Concept source:  d1rjdb_  amino acid (a.a.) range (ARG57)(GLU201)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG57)   (SER69) H1
	   (PRO72)   (ASN96) H2
	   (VAL99)  (GLY105) E3
	  (MET112)  (MET118) H4
	  (ALA123)  (TYR129) E5
	  (TYR129)  (SER143) H6
	  (SER143)  (LEU150) H7
	  (LEU163)  (GLY167) E8
	  (ARG168)  (ALA172) E9
	  (ILE179)  (CYS189) H10
	  (PRO195)  (GLU201) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2     -105.0°   H2                                                                    
E3       97.5°  150.6°   E3                                                             
H4      -85.3°  -26.6° -177.0°   H4                                                      
E5      105.7°  138.4°  -12.4° -165.0°   E5                                               
H6      -84.6°  -82.9°  118.2°  -62.9°  127.3°   H6                                        
H7       91.0°   21.7° -143.2°   35.4° -132.2°  -98.1°   H7                                 
E8      -68.2°  -45.0°  164.0°  -18.9°  173.5°   55.4°  -48.0°   E8                          
E9      110.9°  127.1°  -23.9°  153.6°  -11.7° -136.7° -120.8° -167.8°   E9                   
H10     -88.6°  -50.2°  150.6°  -30.0°  156.1°  -33.4°  -64.8°  -29.3°  158.8°   H10           
E11      81.6°  171.0°  -20.4°  162.4°  -32.6°  104.0° -155.8°  143.9°  -43.9°  137.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1rjdb_ :    (ARG57)  (GLU201)   [view usage] : c.66.1.37 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Leucine carboxy methyltransferase Ppm1 |Leucine carboxy methyltransferase Ppm1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1rjfb_ :    (VAL83)  (GLU201)   [view usage] : c.66.1.37 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Leucine carboxy methyltransferase Ppm1 |Leucine carboxy methyltransferase Ppm1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1rjfc_ :    (ARG57)  (GLU201)   [view usage] : c.66.1.37 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Leucine carboxy methyltransferase Ppm1 |Leucine carboxy methyltransferase Ppm1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1rjda_ :    (ARG57)  (GLU201)   [view usage] : c.66.1.37 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Leucine carboxy methyltransferase Ppm1 |Leucine carboxy methyltransferase Ppm1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1rjfa_ :    (VAL83)  (GLU201)   [view usage] : c.66.1.37 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Leucine carboxy methyltransferase Ppm1 |Leucine carboxy methyltransferase Ppm1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1rjdc_ :    (ASP64)  (GLU201)   [view usage] : c.66.1.37 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Leucine carboxy methyltransferase Ppm1 |Leucine carboxy methyltransferase Ppm1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66