Tableau information
Concept source: d3a2ba_ amino acid (a.a.) range (THR61)(ALA212)
nSSEs in this Concept: 11
String of secondary struct.elems. (SSEs) defining this concept: HHEHEHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR61) (LYS73) H1
(ILE90) (VAL102) H2
(GLU105) (SER111) E3
(THR112) (CYS123) H4
(ASP129) (ASP134) E5
(ALA139) (SER148) H6
(LYS151) (GLY156) E7
(MET160) (LEU170) H8
(ALA175) (ASP181) E9
(PRO194) (ASP204) H10
(ALA206) (ALA212) E11
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -144.6° H2
E3 -79.1° 126.7° E3
H4 71.8° -73.5° 122.7° H4
E5 -147.8° 67.6° -75.5° 139.5° E5
H6 39.5° -106.4° 100.5° -32.9° -166.4° H6
E7 -167.0° 48.1° -92.9° 121.2° -19.8° -153.4° E7
H8 36.9° -108.5° 101.3° -35.0° 170.1° 3.8° 156.1° H8
E9 -125.5° 89.7° -63.0° -162.2° -22.7° 162.2° -41.6° 161.3° E9
H10 45.1° -99.7° 110.6° 26.9° 166.3° 10.1° 147.8° -9.8° -170.6° H10
E11 -106.5° 108.8° -49.9° -172.2° -41.3° 143.6° -60.7° 142.3° -19.1° 151.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4n0wd_ : (PRO42) (MET202) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1ay4a_ : (MET50) (ALA224) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aromatic aminoacid aminotransferase, AroAT |Paracoccus denitrificans [TaxId: 266]
d2doua_ : (LEU61) (PRO199) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2dgka_ : (ASP69) (ALA245) [view usage] : c.67.1.6 |PLP-dependent transferase-like |PLP-dependent transferases |Pyridoxal-dependent decarboxylase |Glutamate decarboxylase beta, GadB |Escherichia coli [TaxId: 562]
d4ot8d_ : (PRO42) (MET202) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d3fz6e_ : (GLU70) (ALA245) [view usage] : c.67.1.6 |PLP-dependent transferase-like |PLP-dependent transferases |Pyridoxal-dependent decarboxylase |Glutamate decarboxylase beta, GadB |Escherichia coli K-12 [TaxId: 83333]
d2bwod_ : (PRO63) (ASP214) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Rhodobacter capsulatus [TaxId: 1061]
d1elqa_ : (THR33) (GLY198) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystine C-S lyase C-des |Synechocystis sp. [TaxId: 1143]
d1bs0a_ : (GLN57) (ASP204) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) |Escherichia coli [TaxId: 562]
d4ot8b_ : (ALA43) (MET202) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1ejia_ : (ARG59) (MSE229) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Serine hydroxymethyltransferase |Mouse (Mus musculus) [TaxId: 10090]
d4eb5b_ : (GLU14) (ALA174) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 224325]
d3ftba_ : (ILE48) (GLU184) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 1488]
d4ot8c_ : (PRO42) (MET202) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d3a2ba_ : (THR61) (ALA212) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Sphingobacterium multivorum [TaxId: 28454]
d1fc4a_ : (PRO59) (ASP210) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |2-amino-3-ketobutyrate CoA ligase |Escherichia coli [TaxId: 562]
d2zc0a_ : (GLU65) (THR215) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thermococcus litoralis [TaxId: 2265]
d4eb5a_ : (GLU14) (ALA174) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 224325]
d1m32a_ : (ASP32) (ASP167) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |2-aminoethylphosphonate transaminase |Salmonella typhimurium [TaxId: 90371]
d3cq5b_ : (SER42) (GLU198) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Corynebacterium glutamicum
d3ezsb_ : (THR48) (GLU193) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d3fkdb_ : (ASN40) (SER168) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Porphyromonas gingivalis [TaxId: 837]
d1wsta1 : (HIS72) (GLY223) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Multiple substrate aminotransferase, MSAT |Thermococcus profundus [TaxId: 49899]
d1ijia_ : (ARG11) (GLU185) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Escherichia coli [TaxId: 562]
d1dj9a_ : (HIS55) (ASP205) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) |Escherichia coli [TaxId: 562]
d1n31a_ : (THR33) (GLY198) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystine C-S lyase C-des |Synechocystis sp. [TaxId: 1143]
d1m32b_ : (ASP32) (ASP167) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |2-aminoethylphosphonate transaminase |Salmonella typhimurium [TaxId: 90371]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67