Protein Concepts Dictionary

Tableau information

Concept source:  d1mnpa_  amino acid (a.a.) range (SER147)(LEU279)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHEEHEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER147)  (GLY159) H1
	  (PRO163)  (VAL175) H2
	  (VAL175)  (LYS180) E3
	  (ASP186)  (ASP191) E4
	  (VAL201)  (LEU207) H5
	  (GLY220)  (ALA223) E6
	  (PRO225)  (GLY231) E7
	  (GLY235)  (LEU239) E8
	  (LEU239)  (HIS247) H9
	  (ASP248)  (GLY257) H10
	  (GLU261)  (LEU279) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2      103.3°   H2                                                                    
E3      111.3°   82.1°   E3                                                             
E4      -85.6° -123.9°  146.0°   E4                                                      
H5     -155.4°   93.5°  -53.0°   99.9°   H5                                               
E6     -126.3°  -51.4° -110.1°   78.5°   78.2°   E6                                        
E7       82.3°   27.5°  -73.4°  139.9° -106.9°  -78.4°   E7                                 
E8       71.4°  161.1°   83.2°  -74.5°  -86.9°  146.3° -135.2°   E8                          
H9      -93.6° -135.4° -129.4°   16.7°  -86.6°   85.4°  156.1°  -63.5°   H9                   
H10      75.3°  -54.9° -136.2°  -75.4° -129.3°  -51.2°   64.5°  136.2°  -91.6°   H10           
H11      56.5° -105.7°   56.3°  123.8°  101.9° -156.7°  -79.3°   56.0°  118.0° -122.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4czna_ :   (ASN147)  (LEU283)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |automated matches |Ceriporiopsis subvermispora [TaxId: 42742]
 d1mnpa_ :   (SER147)  (LEU279)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
 d4czoa_ :   (ASN147)  (LEU283)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |automated matches |Ceriporiopsis subvermispora [TaxId: 42742]
 d1mn1a_ :   (SER147)  (ALA272)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
 d1mn2a_ :   (SER147)  (GLY257)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.93