Protein Concepts Dictionary

Tableau information

Concept source:  d4axha2  amino acid (a.a.) range (THR548)(LEU648)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHEEEEEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR548)  (LEU560) H1
	  (ASP561)  (VAL566) H2
	  (MET570)  (PHE576) E3
	  (LYS580)  (ARG588) E4
	  (VAL591)  (GLY597) E5
	  (GLY597)  (LYS602) E6
	  (ASP604)  (LEU609) E7
	  (THR610)  (ARG620) H8
	  (PRO625)  (GLY631) H9
	  (THR632)  (GLY637) E10
	  (LYS641)  (LEU648) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2      -80.8°   H2                                                                    
E3      154.4°  117.8°   E3                                                             
E4      -13.2°  -75.3°  165.6°   E4                                                      
E5      170.3°   90.5°  -35.1°  158.3°   E5                                               
E6       52.6°   29.2° -140.3°   49.9°  119.2°   E6                                        
E7      130.9°  133.8°  -23.5°  142.4°  -58.6° -143.9°   E7                                 
H8       28.5°  105.7° -126.2°   40.0° -161.2°   76.5°  102.7°   H8                          
H9     -144.1°  -65.5°   52.6° -140.9°   29.9°  -92.0°   72.7°  153.5°   H9                   
E10     -61.6°  -41.4°  144.0°  -49.9°  108.9°  -40.7°  167.4°  -89.8°  -96.9°   E10           
H11      64.5°  142.6°  -99.6°   67.7° -122.8°  116.8°  -82.3°  -46.1°  151.1°  105.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4av7b2 :   (THR548)  (LEU648)   [view usage] : d.106.1.0 |SCP-like |SCP-like |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
 d2cfua1 :   (THR540)  (GLY638)   [view usage] : d.106.1.3 |SCP-like |SCP-like |Alkylsulfatase C-terminal domain-like |Alkylsulfatase SdsA1 |Pseudomonas aeruginosa [TaxId: 287]
 d2yheb2 :   (THR548)  (LEU648)   [view usage] : d.106.1.0 |SCP-like |SCP-like |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
 d4axhb2 :   (THR548)  (LEU648)   [view usage] : d.106.1.0 |SCP-like |SCP-like |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
 d2yhea2 :   (THR548)  (LEU648)   [view usage] : d.106.1.0 |SCP-like |SCP-like |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
 d4axha2 :   (THR548)  (LEU648)   [view usage] : d.106.1.0 |SCP-like |SCP-like |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.106