Protein Concepts Dictionary

Tableau information

Concept source:  d1smja_  amino acid (a.a.) range (SER108)(TRP325)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER108)  (LEU133) H1
	  (ASP136)  (PRO142) E2
	  (PRO142)  (ASN159) H3
	  (ASN163)  (ASP168) H4
	  (HIS171)  (ARG190) H5
	  (TYR198)  (SER226) H6
	  (LEU233)  (ASN239) H7
	  (ASP251)  (ASN283) H8
	  (ASN283)  (VAL297) H9
	  (SER304)  (LEU311) H10
	  (LEU311)  (TRP325) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      151.3°   E2                                                                    
H3      144.3°  -54.3°   H3                                                             
H4      -19.4°  132.0°  147.5°   H4                                                      
H5     -103.3°   52.6°  106.9°  -87.1°   H5                                               
H6      113.4°  -93.9°  -44.5°  130.8° -141.9°   H6                                        
H7     -137.4°   26.8°  -46.5°  121.0°   67.1°  -91.0°   H7                                 
H8      -54.1° -129.8°  143.3°  -63.4°  -89.2°  103.8°  154.8°   H8                          
H9     -116.1°   89.0°   36.5° -131.3°  140.5°  -10.9°   82.3° -114.2°   H9                   
H10      81.7°  -82.4° -133.8°   72.7°  -34.5° -141.1° -101.2°   54.7°  149.6°   H10           
H11      84.0°  -67.3° -110.3°   64.6°  -35.9° -154.1°  -64.1°  102.0° -143.8°  -57.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ve3a_ :   (PRO122)  (PRO316)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
 d4h24c_ :   (SER108)  (ARG323)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d4h24d_ :   (SER108)  (LEU324)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d1smja_ :   (SER108)  (TRP325)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d3ekbb_ :   (HIS116)  (TRP325)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d1smjd_ :   (SER108)  (TRP325)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.104