Tableau information
Concept source: d2yjpa_ amino acid (a.a.) range (THR40)(PRO144)
nSSEs in this Concept: 11
String of secondary struct.elems. (SSEs) defining this concept: HEHHHEHEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR40) (GLY48) H1
(GLY48) (GLY53) E2
(LYS58) (GLY62) H3
(GLY72) (LEU85) H4
(SER88) (GLU93) H5
(GLU93) (GLU98) E6
(ARG102) (SER108) H7
(ASP112) (ASN117) E8
(PRO122) (VAL128) H9
(VAL128) (ASP132) E10
(TYR134) (PRO144) E11
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 111.5° E2
H3 -79.2° 167.6° H3
H4 -87.2° 158.8° -18.6° H4
H5 100.2° -57.5° 128.6° 110.9° H5
E6 115.6° -8.6° 165.1° 151.1° 50.3° E6
H7 85.8° 150.6° -31.6° -14.4° 97.0° 141.9° H7
E8 -93.5° -43.8° 132.0° 149.1° -99.4° -52.3° -163.4° E8
H9 67.5° 145.2° -43.8° -33.1° 87.9° 138.2° -22.2° 160.7° H9
E10 -90.0° -104.1° 68.6° 85.1° -161.2° -111.0° 99.4° -64.0° -110.7° E10
E11 76.0° -35.8° 155.2° -157.3° -58.6° -39.6° 145.3° 49.2° 124.5° 109.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1xt8b_ : (SER12) (PRO116) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Putative amino-acid transporter CjaA |Campylobacter jejuni [TaxId: 197]
d1xt8a1 : (SER12) (PRO116) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Putative amino-acid transporter CjaA |Campylobacter jejuni [TaxId: 197]
d2yjpa_ : (THR40) (PRO144) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Neisseria gonorrhoeae [TaxId: 242231]
d2yjpb_ : (THR40) (PRO144) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Neisseria gonorrhoeae [TaxId: 242231]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94