Protein Concepts Dictionary

Tableau information

Concept source:  d1ft8c1  amino acid (a.a.) range (LYS205)(PHE345)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS205)  (TYR220) H1
	  (GLN225)  (LEU229) E2
	  (PRO236)  (ASN242) H3
	  (ARG250)  (ILE264) H4
	  (LEU268)  (LEU272) E5
	  (LEU280)  (PRO291) H6
	  (LYS294)  (GLY300) E7
	  (SER305)  (LYS313) H8
	  (GLU318)  (LEU322) E9
	  (ASN325)  (PHE331) H10
	  (ASP333)  (PHE345) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      124.5°   E2                                                                    
H3      150.0°  -41.6°   H3                                                             
H4      -55.7°  164.1°  128.6°   H4                                                      
E5      118.7°   -5.9°  -46.2°  162.2°   E5                                               
H6      -61.3°  165.7°  126.1°   -6.5°  166.1°   H6                                        
E7      108.8°  -15.9°  -53.8°  155.2°  -10.0°  160.9°   E7                                 
H8      -88.9°  143.4°  102.0°  -33.3°  148.2°  -27.6°  154.6°   H8                          
E9      116.3°   -8.3°  -47.7°  160.4°   -2.5°  164.9°    7.5°  149.7°   E9                   
H10     -61.2°  -93.8° -131.9°  -98.8°  -91.0° -100.1°  -87.3° -117.7°  -90.5°   H10           
H11    -117.3°  117.3°   78.9°  -62.1°  122.9°  -56.2°  132.0°  -28.8°  125.0°  125.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1koha1 :   (LYS205)  (ILE341)   [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
 d1kooa1 :   (LYS205)  (PHE345)   [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
 d3rw7a2 :   (LYS205)  (PHE345)   [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ft8b_ :   (LYS205)  (PHE345)   [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
 d1ft8d_ :   (LYS205)  (PHE345)   [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
 d1ft8c1 :   (LYS205)  (PHE345)   [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.10