Protein Concepts Dictionary

Tableau information

Concept source:  d2vk8a2  amino acid (a.a.) range (GLU195)(THR336)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU195)  (ALA211) H1
	  (PRO214)  (ALA220) E2
	  (ALA220)  (ASP226) H3
	  (LYS228)  (GLN239) H4
	  (PRO241)  (THR245) E5
	  (LYS269)  (ALA279) H6
	  (ASP280)  (GLY286) E7
	  (ASN305)  (SER311) E8
	  (HIS313)  (ARG317) E9
	  (ALA319)  (GLY323) E10
	  (MET326)  (THR336) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      129.5°   E2                                                                    
H3     -137.1°  -62.9°   H3                                                             
H4      -35.9° -165.2°  124.1°   H4                                                      
E5      121.6°  -24.7°  -84.6°  151.1°   E5                                               
H6      116.3° -113.7°   75.8°   81.1° -111.9°   H6                                        
E7     -138.1°  -19.3°   43.8° -161.7°  -42.9° -104.4°   E7                                 
E8     -139.2°  -30.4°   33.0°  152.4°  -54.0°   99.2°  -11.2°   E8                          
E9       37.6°  143.1° -153.9°  -31.9°  120.4°  -86.9°  162.3°  172.9°   E9                   
E10    -136.6°  -41.3°   23.2°  141.9°  -65.0°   95.0°  -22.2°  -11.0°  173.1°   E10           
H11     -49.6° -150.1°  -97.9°   27.5° -167.8°   80.2° -135.2° -125.0°  -59.3°  114.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2vk8a2 :   (GLU195)  (THR336)   [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ovma1 :   (ASP191)  (GLN337)   [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Indole-3-pyruvate decarboxylase |Enterobacter cloacae [TaxId: 550]
 d1zpda1 :   (ASP191)  (LYS334)   [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Pyruvate decarboxylase |Zymomonas mobilis [TaxId: 542]
 d2vk1a2 :   (GLU195)  (LYS342)   [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2wvaa2 :   (ASP191)  (LYS334)   [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Zymomonas mobilis [TaxId: 542]
 d2vjya2 :   (GLU195)  (LEU334)   [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
 d2w93b2 :   (GLU195)  (LYS342)   [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.31