Protein Concepts Dictionary

Tableau information

Concept source:  d5reqa1  amino acid (a.a.) range (LEU301)(LYS469)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU301)  (GLY316) H1
	  (SER324)  (SER332) E2
	  (ASP340)  (HIS359) H3
	  (GLN361)  (SER367) E4
	  (SER367)  (ILE372) H5
	  (THR376)  (GLN392) H6
	  (ASP401)  (SER406) H7
	  (TYR408)  (GLY431) H8
	  (ALA434)  (GLY440) H9
	  (ILE441)  (GLY460) H10
	  (LEU464)  (LYS469) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      144.8°   E2                                                                    
H3      -42.3°  170.4°   H3                                                             
E4      139.4°   -6.0°  175.7°   E4                                                      
H5       83.4°  -63.8°  119.3°   60.1°   H5                                               
H6      -77.8°  135.4°  -35.9°  141.5° -138.4°   H6                                        
H7      -97.1°   89.8°  -82.1°   93.6°  -80.1°   66.1°   H7                                 
H8      -40.4°  104.6°  -81.5°   99.5°   44.5° -114.7°  -97.1°   H8                          
H9      121.5°   25.9°  154.4°  -23.4°  -38.4°  144.4°   81.1°   81.5°   H9                   
H10     174.9°  -37.0°  135.2°  -42.7°  -96.3°   99.4°   77.9°  140.3°  -58.8°   H10           
H11     123.3°   33.3°  142.3°   34.1°  -42.6°  127.3°   63.8°   86.9°   17.5°  -55.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4reqa1 :   (PHE294)  (LYS469)   [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
 d5reqa1 :   (LEU301)  (LYS469)   [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
 d1e1ca1 :   (PHE295)  (LYS469)   [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
 d1reqa1 :   (PHE294)  (LYS469)   [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1