Protein Concepts Dictionary

Tableau information

Concept source:  d2a0na_  amino acid (a.a.) range (LYS58)(SER172)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS58)   (GLN72) H1
	   (PRO76)   (GLY82) E2
	   (PHE86)   (GLY96) H3
	   (ASP98)  (THR104) E4
	  (THR104)  (ASN109) H5
	  (SER111)  (GLY121) H6
	  (VAL125)  (ALA131) E7
	  (GLU137)  (THR142) E8
	  (LYS146)  (GLY150) E9
	  (LEU153)  (GLY164) H10
	  (GLY166)  (SER172) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      172.1°   E2                                                                    
H3      -27.0°  150.2°   H3                                                             
E4      147.7°  -28.8°  157.0°   E4                                                      
H5     -114.2°   72.1° -133.3°  -67.4°   H5                                               
H6      -36.4°  148.2°  -29.2°  173.8°  107.1°   H6                                        
E7      115.7°  -57.6°  120.3°  -37.2°  -97.8° -148.9°   E7                                 
E8     -100.5°   82.0°   77.4° -110.8° -102.7°   67.0°  125.7°   E8                          
E9      -92.2°   91.8° -118.0°   73.8°   31.4° -103.1°  -88.4°  130.8°   E9                   
H10     -67.3°  119.5°  -62.8°  139.6°   79.8°  -34.3°  176.8°   53.4°   90.4°   H10           
E11     110.9°  -61.3°  106.0°  -51.2° -117.2°  134.8°  -21.3°  109.6° -109.5°  160.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1h5yb_ :    (THR64)  (SER175)   [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF |Pyrobaculum aerophilum [TaxId: 13773]
 d2a0na_ :    (LYS58)  (SER172)   [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |automated matches |Thermotoga maritima [TaxId: 2336]
 d1gpwa_ :    (ALA54)  (SER172)   [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]
 d1ka9f_ :    (ARG60)  (SER173)   [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF |Thermus thermophilus [TaxId: 274]
 d1h5ya_ :    (ARG62)  (SER175)   [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF |Pyrobaculum aerophilum [TaxId: 13773]
 d2y88a_ :    (HIS64)  (ASP171)   [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1thfd_ :    (GLU57)  (SER172)   [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]
 d1vh7a_ :    (ALA54)  (SER172)   [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1