Protein Concepts Dictionary

Tableau information

Concept source:  d1ob0a2  amino acid (a.a.) range (HIS205)(ILE351)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (HIS205)  (GLN224) H1
	  (ASP226)  (ALA232) E2
	  (PHE238)  (GLY253) H3
	  (PHE257)  (TRP263) E4
	  (LEU267)  (ASN278) H5
	  (ASN280)  (VAL286) E6
	  (VAL286)  (GLN298) H7
	  (ASP303)  (ASN309) H8
	  (THR311)  (HIS316) H9
	  (SER320)  (VAL324) E10
	  (GLN340)  (ILE351) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      139.2°   E2                                                                    
H3      -42.3°  166.4°   H3                                                             
E4      125.8°  -13.4°  161.9°   E4                                                      
H5      -91.0°  127.9°  -48.8°  140.9°   H5                                               
E6       84.1°  -55.2°  124.7°  -41.8°  167.7°   E6                                        
H7       70.3°  -70.0°  112.3°  -56.6° -161.1°  -16.4°   H7                                 
H8     -106.1°  112.1°  -63.8°  125.0°  -15.9°  161.0° -172.1°   H8                          
H9      -90.4°  126.3°  -61.6°  136.4°  -40.0° -150.8° -138.4°  -47.1°   H9                   
E10      67.3°  -73.3°  102.4°  -60.9°  142.0°  -26.2°  -27.9°  144.4° -156.5°   E10           
H11     -86.4°  131.5°  -55.7°  142.3°  -35.6°  154.3°  140.1°  -44.5°    6.2° -153.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1e3xa2 :   (HIS205)  (LYS344)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
 d1ob0a2 :   (HIS205)  (ILE351)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Bacillus licheniformis [TaxId: 1402]
 d1blia2 :   (HIS205)  (ILE351)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Bacillus licheniformis [TaxId: 1402]
 d3bsha1 :   (ASN154)  (HIS316)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
 d1ud2a2 :   (HIS205)  (ILE351)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Bacillus sp., ksm-k38 [TaxId: 1409]
 d3qgva1 :   (SER182)  (TYR306)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Pyrococcus woesei [TaxId: 2262]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1