Protein Concepts Dictionary

Tableau information

Concept source:  d4pfqa_  amino acid (a.a.) range (ASP39)(PRO159)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP39)   (ASP57) H1
	   (PRO63)   (LEU69) E2
	   (VAL73)   (ILE83) H3
	   (GLU88)   (GLY98) E4
	   (GLY98)  (SER104) H5
	  (SER104)  (LEU110) E6
	  (ASN121)  (ASP127) E7
	  (ASP127)  (SER131) E8
	  (THR134)  (ARG145) H9
	  (SER149)  (LEU155) E10
	  (LEU155)  (PRO159) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      142.9°   E2                                                                    
H3      -52.7° -163.3°   H3                                                             
E4      115.4°  -35.3°  158.5°   E4                                                      
H5       64.0° -138.0°   44.9° -115.3°   H5                                               
E6      -96.1°   84.8°  -87.6°  112.8° -131.9°   E6                                        
E7      169.5°  -32.1°  134.0°  -55.3° -113.9°   92.5°   E7                                 
E8       85.6°   74.3° -118.9°   39.7°  -79.2°  146.0°   83.9°   E8                          
H9      -27.5°  136.9°  -51.7°  127.8°   82.6°  -68.7°  160.9° -109.6°   H9                   
E10     164.3°  -52.7°  112.1°  -77.4° -102.9°   86.4°  -22.4° -101.0°  149.4°   E10           
E11     102.5°   66.8° -121.6°   38.5°  -77.0°  150.8°   67.3°  -20.3° -128.4°  -81.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4pfqa_ :    (ASP39)  (PRO159)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Brachybacterium faecium [TaxId: 446465]
 d3o7mb_ :    (SER11)  (GLU132)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d3h83b_ :    (SER12)  (THR133)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d4pfqd_ :    (GLY51)  (PRO159)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Brachybacterium faecium [TaxId: 446465]
 d4pfqc_ :    (GLY51)  (PRO159)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Brachybacterium faecium [TaxId: 446465]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.61