Protein Concepts Dictionary

Tableau information

Concept source:  d3osxa_  amino acid (a.a.) range (LEU234)(VAL376)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU234)  (LYS242) H1
	  (PRO246)  (ALA251) E2
	  (GLU257)  (GLY269) H3
	  (LYS272)  (LYS277) E4
	  (ARG284)  (THR296) H5
	  (ASN297)  (SER302) E6
	  (LEU317)  (LYS321) E7
	  (LYS321)  (LYS327) E8
	  (THR329)  (ASP334) E9
	  (GLU338)  (SER356) H10
	  (SER358)  (VAL376) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      158.8°   E2                                                                    
H3      -17.5° -164.7°   H3                                                             
E4      140.5°  -18.6° -148.2°   E4                                                      
H5       23.9° -155.7°   34.4°  146.9°   H5                                               
E6     -161.3°  -38.8°  144.3°  -55.8°  150.8°   E6                                        
E7      -39.6°  125.0°  -40.6°  107.6°   62.9° -140.7°   E7                                 
E8     -124.6°   59.5° -110.5°   62.3° -144.5°  -47.7°   93.3°   E8                          
E9       53.1° -121.4°   67.8° -117.3°   34.4° -135.6°   83.4°  176.3°   E9                   
H10    -136.6°   26.9° -137.8°   15.8° -152.8°   55.4°  -98.6°   48.6° -130.4°   H10           
H11      31.2° -164.9°   30.4° -166.3°  -19.5°  135.3°   68.9°  130.2°  -49.8° -167.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3m6ca_ :   (LEU232)  (GLY373)   [view usage] : c.8.5.0 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1kida_ :   (PRO235)  (VAL376)   [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |GroEL, A domain |Escherichia coli [TaxId: 562]
 d1la1a_ :   (LEU234)  (VAL376)   [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |GroEL, A domain |Escherichia coli [TaxId: 562]
 d3vz8a_ :   (LEU234)  (VAL376)   [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |automated matches |Escherichia coli [TaxId: 562]
 d1sjpa2 :   (VAL227)  (LEU369)   [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |GroEL, A domain |Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]
 d3osxa_ :   (LEU234)  (VAL376)   [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |automated matches |Xenorhabdus nematophila [TaxId: 628]
 d3vz7a_ :   (ASN229)  (VAL376)   [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |automated matches |Escherichia coli [TaxId: 562]
 d1grua_ :   (PRO235)  (TYR360)   [view usage] : i.16.1.1 |GroE chaperon |GroE chaperon |GroE chaperon |GroE chaperon |Escherichia coli [TaxId: 562]
 d1fy9a_ :   (LEU234)  (VAL376)   [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |GroEL, A domain |Escherichia coli [TaxId: 562]
 d1fyaa_ :   (LEU234)  (VAL376)   [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |GroEL, A domain |Escherichia coli [TaxId: 562]
 d3vz6a_ :   (VAL236)  (VAL376)   [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1aona2 :   (PRO235)  (TYR360)   [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |GroEL, A domain |Escherichia coli [TaxId: 562]
 d1oela2 :   (LEU234)  (GLN366)   [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |GroEL, A domain |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.8,    i.16