Protein Concepts Dictionary

Tableau information

Concept source:  d2b7na2  amino acid (a.a.) range (ILE103)(ALA225)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEHEEHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE103)  (ASN115) H1
	  (LYS118)  (THR124) E2
	  (ARG132)  (GLY143) H3
	  (GLY143)  (ARG148) E4
	  (ALA154)  (ASP159) E5
	  (ASP159)  (VAL165) H6
	  (LEU168)  (HIS174) H7
	  (THR182)  (GLU188) E8
	  (SER191)  (ALA201) H9
	  (ASP204)  (ASN210) E10
	  (VAL213)  (ALA225) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      146.4°   E2                                                                    
H3      -43.4°  156.4°   H3                                                             
E4      104.9°  -54.7° -146.7°   E4                                                      
E5       73.8°  -75.4°   97.6°  -77.1°   E5                                               
H6      -72.4°   87.7° -112.9°   33.8°  -76.7°   H6                                        
H7     -122.0°   86.9° -100.6°   88.8°  161.6°   98.1°   H7                                 
E8       73.3°  -82.4°   84.1°  -96.9°  -20.5°  -96.1°  161.8°   E8                          
H9      -98.3°   97.0° -102.2°   67.6°  140.6°   64.3°  -35.9°  160.4°   H9                   
E10      90.1°  -75.9°   83.8° -110.5°  -42.6° -119.2°  137.6°  -24.8°  171.5°   E10           
H11     -72.9°  117.1°  -85.4°   72.7°  126.5°   54.0°  -57.9°  140.3°  -25.6°  162.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qapa1 :   (VAL130)  (ARG248)   [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain |Salmonella typhimurium [TaxId: 90371]
 d3tqvb2 :   (THR120)  (ALA239)   [view usage] : c.1.17.0 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |automated matches |automated matches |Francisella tularensis [TaxId: 177416]
 d3paja2 :   (CYS129)  (ALA249)   [view usage] : c.1.17.0 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
 d1qpna1 :   (ILE117)  (ARG235)   [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain |Mycobacterium tuberculosis [TaxId: 1773]
 d2b7na2 :   (ILE103)  (ALA225)   [view usage] : c.1.17.0 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
 d3pajb2 :   (CYS129)  (ALA249)   [view usage] : c.1.17.0 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1