Protein Concepts Dictionary

Tableau information

Concept source:  d2z6ra_  amino acid (a.a.) range (SER118)(VAL263)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEHEEHEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER118)  (GLY124) H1
	  (LYS132)  (TYR138) E2
	  (TYR148)  (GLY159) H3
	  (LEU160)  (LYS169) E4
	  (ARG173)  (ALA178) E5
	  (ALA178)  (LYS193) H6
	  (VAL203)  (ARG208) E7
	  (PRO214)  (GLY219) E8
	  (PRO233)  (VAL238) E9
	  (ILE244)  (GLY255) H10
	  (PRO257)  (VAL263) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2       97.1°   E2                                                                    
H3      -50.8° -147.9°   H3                                                             
E4      122.4°  -31.9° -161.8°   E4                                                      
E5      -40.3°  123.1°  -33.3°  155.0°   E5                                               
H6      -92.0°   99.2°  -83.8°  114.2°  -59.9°   H6                                        
E7      117.6°  -75.3°  116.6°  -48.3° -147.2°  150.3°   E7                                 
E8      -60.4°   95.5°  -70.0°  123.7°  -37.6°  -32.3°  170.5°   E8                          
E9      -64.0°  124.0°  -47.7°  149.3°   24.9°  -37.0°  160.7°  -28.6°   E9                   
H10      83.9°  -34.8° -125.8°   40.0° -123.1° -131.7°   54.9° -115.9° -140.7°   H10           
H11     -97.1°  155.0°   50.1° -140.5°   60.8°   59.9° -115.3°   74.1°   47.4° -168.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2huta_ :   (SER118)  (ARG262)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2ed5a_ :   (SER118)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2z6rb_ :   (SER118)  (VAL265)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2z6ra_ :   (SER118)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.90