Protein Concepts Dictionary

Tableau information

Concept source:  d4gqsc_  amino acid (a.a.) range (VAL50)(PRO220)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEEHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (VAL50)   (GLY62) H1
	   (PHE65)   (GLY70) E2
	   (MET74)   (GLY79) E3
	   (GLY79)   (GLY91) H4
	  (PHE100)  (ALA106) H5
	  (GLY117)  (ARG132) H6
	  (ARG132)  (GLY137) H7
	  (GLU142)  (LYS160) H8
	  (PRO166)  (ILE182) H9
	  (ASP188)  (THR210) H10
	  (PRO211)  (PRO220) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      135.0°   E2                                                                    
E3      -81.2°  142.1°   E3                                                             
H4       95.9°  -78.1° -114.5°   H4                                                      
H5     -126.1°  -56.6°  116.5°  -30.3°   H5                                               
H6     -119.6°  105.4°  -40.0°  -97.8°   83.7°   H6                                        
H7      131.1°  -46.6° -123.7°   37.3°   10.0°  -87.9°   H7                                 
H8     -124.3°   67.6°  -83.1°  138.9°  108.7°  -71.4°  101.7°   H8                          
H9       81.2°  -92.4°  106.5°  -15.7°  -45.6°  100.3°   53.0°  154.3°   H9                   
H10      38.8°  103.7° -102.2°  115.3°  136.3° -139.6°  132.5°  -94.9°  105.9°   H10           
H11     -54.4°  -88.7°  128.4°   54.8°   79.0° -146.5°   80.0°  141.5°   47.9°  -60.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1og2a_ :    (ILE50)  (PHE219)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c9 |Human (Homo sapiens) [TaxId: 9606]
 d4gqsc_ :    (VAL50)  (PRO220)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4gqsa_ :    (VAL50)  (PRO220)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1pq2a_ :    (CYS51)  (PHE219)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c8 |Human (Homo sapiens) [TaxId: 9606]
 d1n6ba_ :    (ILE50)  (PHE219)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c5 |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1og5a_ :    (ILE50)  (PHE219)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c9 |Human (Homo sapiens) [TaxId: 9606]
 d2vn0a_ :    (ILE50)  (PRO220)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c8 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.104