Protein Concepts Dictionary

Tableau information

Concept source:  d3e7nb_  amino acid (a.a.) range (ASN8)(ALA135)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEEHEHHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASN8)   (LEU18) H1
	   (ASP22)   (CYS27) E2
	   (ALA38)   (MSE42) E3
	   (THR45)   (MSE62) H4
	   (GLU65)   (ALA70) E5
	   (ILE73)   (PRO78) H6
	   (PRO78)   (GLN95) H7
	   (ASN97)  (TYR103) E8
	  (THR105)  (SER116) H9
	  (GLN117)  (GLY123) E10
	  (ALA129)  (ALA135) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2     -148.3°   E2                                                                    
E3     -139.0°  -41.0°   E3                                                             
H4      -34.5° -159.4°  120.1°   H4                                                      
E5      117.7°  -40.6°  -80.9°  152.2°   E5                                               
H6     -144.1°   44.8°   10.8° -118.8°   85.4°   H6                                        
H7      -55.3°  148.4°  108.1°  -21.2° -170.9° -103.6°   H7                                 
E8      104.8°  -56.5°  -97.0°  138.4°  -16.1°  101.2°  154.8°   E8                          
H9       85.1° -126.6°  107.7°   59.9° -135.0°  -97.6°   43.5°  128.6°   H9                   
E10    -148.3°  -19.1°  -22.0°  141.3°  -59.1°   27.2°  130.0°  -75.2° -120.3°   E10           
E11     -42.9°  165.7°  125.8°   16.5°  153.2° -121.1°  -17.7°  137.2°   44.7°  147.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3e7na_ :     (ASN8)  (ALA135)   [view usage] : c.133.1.0 |RbsD-like |RbsD-like |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
 d3e7nb_ :     (ASN8)  (ALA135)   [view usage] : c.133.1.0 |RbsD-like |RbsD-like |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
 d3e7ng_ :     (ASN8)  (ALA135)   [view usage] : c.133.1.0 |RbsD-like |RbsD-like |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
 d3p12c_ :    (GLU11)  (SER132)   [view usage] : c.133.1.0 |RbsD-like |RbsD-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.133