Protein Concepts Dictionary

Tableau information

Concept source:  d4mqqb_  amino acid (a.a.) range (ALA75)(HIS210)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEEHEHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA75)   (VAL86) H1
	   (ASN88)   (GLY93) E2
	   (GLY94)   (GLU98) E3
	   (GLU98)  (ILE110) H4
	  (ASP116)  (ASP122) E5
	  (GLY124)  (ARG142) H6
	  (ARG148)  (TRP153) E7
	  (PHE162)  (CYS168) H8
	  (ASP169)  (MET174) H9
	  (GLN185)  (PRO189) E10
	  (PRO197)  (HIS210) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2       68.0°   E2                                                                    
E3      136.8° -139.6°   E3                                                             
H4     -141.4°  -74.7°  -70.8°   H4                                                      
E5      -83.0° -117.3°   99.6°  124.3°   E5                                               
H6       69.5°   19.2° -124.9°  -72.0°  135.0°   H6                                        
E7     -163.2°  128.8°   32.8°   55.1°  -86.7°  126.5°   E7                                 
H8      156.1°   88.1°  -63.0°   16.7° -109.4°   88.0°  -40.7°   H8                          
H9      -71.7° -121.2°   99.0°  140.3°  -16.9° -135.0°   95.2° -124.4°   H9                   
E10     171.8°  112.6°  -37.7°   37.9° -103.4°  108.2°  -18.4°  -25.9° -113.2°   E10           
H11     -26.2°  -47.5° -162.7° -121.6°   83.3°  -56.4°  163.6°  132.2°  -78.8°  158.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3hmua_ :    (ASP72)  (GLY194)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 89184]
 d1mgva_ :    (HIS61)  (ARG202)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA |Escherichia coli [TaxId: 562]
 d4mqpb_ :    (ALA75)  (HIS210)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d4cxrb_ :    (PRO74)  (HIS210)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d4a6ta_ :    (LYS69)  (ILE215)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
 d4mqqb_ :    (ALA75)  (HIS210)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d4a6tc_ :    (LYS69)  (GLY192)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
 d4mqpa_ :    (HIS73)  (HIS210)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d3hmub_ :    (ASP72)  (GLY194)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 89184]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67