Protein Concepts Dictionary

Tableau information

Concept source:  d1wooa2  amino acid (a.a.) range (ILE32)(VAL159)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEEHEEEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE32)   (SER42) H1
	   (SER42)   (ASP47) E2
	   (GLY52)   (GLY58) E3
	   (GLU60)   (LEU68) H4
	   (GLY79)   (TYR83) E5
	   (LEU97)  (SER103) E6
	  (ASP105)  (VAL111) E7
	  (GLU117)  (SER127) H8
	  (ASP131)  (ASN136) E9
	  (THR141)  (GLN147) E10
	  (LYS150)  (VAL159) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2     -118.5°   E2                                                                    
E3      -43.9°  -75.7°   E3                                                             
H4     -127.9°   99.4°  133.3°   H4                                                      
E5     -132.9°   87.9°  126.6°   12.1°   E5                                               
E6       37.4°  -87.7°  -34.1° -163.4°  160.6°   E6                                        
E7     -142.5°   98.4°  161.7°   29.4°  -35.1°  164.2°   E7                                 
H8      -52.9°  -70.1°  -12.7°  121.8°  114.3°  -46.6°  149.1°   H8                          
E9      134.1°   98.9°  162.3°  -63.8°  -69.2°  130.2°  -34.5° -167.9°   E9                   
E10     -74.7°  164.3°  114.9°  -65.0°  -76.5°  107.6°  -67.8°  117.6°  -74.2°   E10           
H11     -78.7°  -58.9°  -60.9°  153.2°  144.6°  -41.7°  131.0°  -68.5°  101.7°  135.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1v5va2 :    (SER35)  (LEU168)   [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |Glycine cleavage system T protein, GcvT |Pyrococcus horikoshii [TaxId: 53953]
 d1pj5a4 :   (ALA489)  (SER620)   [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |N,N-dimethylglycine oxidase domain 3 |Arthrobacter globiformis [TaxId: 1665]
 d1vloa2 :    (GLN33)  (THR158)   [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |Glycine cleavage system T protein, GcvT |Escherichia coli [TaxId: 562]
 d3a8ia1 :    (GLN32)  (THR157)   [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3a8ka1 :    (GLN32)  (THR157)   [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1yx2b1 :    (SER32)  (THR159)   [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |Glycine cleavage system T protein, GcvT |Bacillus subtilis [TaxId: 1423]
 d1wooa2 :    (ILE32)  (VAL159)   [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |Glycine cleavage system T protein, GcvT |Thermotoga maritima [TaxId: 2336]
 d1yx2a1 :    (SER32)  (THR159)   [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |Glycine cleavage system T protein, GcvT |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.250