Protein Concepts Dictionary

Tableau information

Concept source:  d1qrta2  amino acid (a.a.) range (SER149)(LYS280)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEEEHEHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER149)  (GLY163) H1
	  (LYS169)  (ALA174) E2
	  (LEU190)  (ILE193) E3
	  (CYS206)  (MET210) E4
	  (MET210)  (GLY223) H5
	  (THR225)  (THR230) E6
	  (PHE233)  (ILE247) H7
	  (PRO250)  (SER259) E8
	  (ARG260)  (GLU264) E9
	  (TYR265)  (SER269) E10
	  (SER269)  (LYS280) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2     -128.2°   E2                                                                    
E3       47.7°  152.0°   E3                                                             
E4      117.0°  -39.8°  163.0°   E4                                                      
H5      -93.5°   46.9° -106.3°  -79.8°   H5                                               
E6       66.9° -123.7°   82.3°  -84.0°  145.0°   E6                                        
H7     -114.8°   77.3°  -81.5° -114.9°  -60.3°  153.7°   H7                                 
E8       64.7° -102.7°   98.3°  -65.3°  119.3°  -26.7°  179.3°   E8                          
E9       44.5° -115.7°   80.5°  -82.5°  115.6°  -30.9°  159.2°   20.3°   E9                   
E10    -113.1°   99.3°  -67.8° -128.9°   88.2° -125.6°   28.2° -152.3° -145.0°   E10           
H11      19.9°  148.1°   33.0°  130.1°  109.3°   60.2°  111.6°   68.1°   48.6° -100.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1euqa2 :   (SER149)  (LYS280)   [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutaminyl-tRNA synthetase (GlnRS) |Escherichia coli [TaxId: 562]
 d4jxxa1 :   (VAL150)  (LYS280)   [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutaminyl-tRNA synthetase (GlnRS) |Escherichia coli [TaxId: 562]
 d1qrta2 :   (SER149)  (LYS280)   [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutaminyl-tRNA synthetase (GlnRS) |Escherichia coli [TaxId: 562]
 d1qrsa2 :   (SER149)  (LYS280)   [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutaminyl-tRNA synthetase (GlnRS) |Escherichia coli [TaxId: 562]
 d1qrua2 :   (SER149)  (LYS280)   [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutaminyl-tRNA synthetase (GlnRS) |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.26