Protein Concepts Dictionary

Tableau information

Concept source:  d4qiij_  amino acid (a.a.) range (ASP29)(VAL154)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEEEHEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP29)   (LEU34) H1
	   (ASP36)   (ARG41) E2
	   (ALA46)   (PHE52) E3
	   (ARG58)   (PRO63) E4
	   (PRO63)   (SER79) H5
	   (GLY83)   (SER93) E6
	   (GLY97)  (PHE101) E7
	  (GLY114)  (SER119) E8
	  (ALA129)  (LEU134) E9
	  (ILE136)  (ARG144) H10
	  (LYS148)  (VAL154) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2     -164.0°   E2                                                                    
E3        7.6°  170.5°   E3                                                             
E4      101.4°  -94.6°   94.6°   E4                                                      
H5     -171.4°  -12.2° -176.3°  -84.1°   H5                                               
E6      -31.6°  136.7°  -34.3°  120.0°  148.9°   E6                                        
E7      122.9°  -68.4°  120.2°  -47.8°  -56.4°  154.5°   E7                                 
E8       92.8°  -87.5°   89.7°  -90.3°  -93.8°   68.6° -126.4°   E8                          
E9     -117.1°   51.2° -124.3°  124.3°   54.4° -113.5°   77.1°  123.7°   E9                   
H10    -154.9°   16.1° -162.1°   97.7°   16.7° -140.8°  -61.4°  103.2°   37.8°   H10           
E11     -38.1°  126.3°  -44.2° -137.9°  137.6°  -21.1° -149.8°   82.9°  -92.8° -124.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4qiia_ :    (ASP29)  (VAL154)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d4qiib_ :    (ASP29)  (VAL154)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d4qiid_ :    (ASP29)  (VAL154)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d4qiij_ :    (ASP29)  (VAL154)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14