Protein Concepts Dictionary

Tableau information

Concept source:  d2nv5a_  amino acid (a.a.) range (THR1306)(CYS1486)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	 (THR1306) (ARG1318) H1
	 (ALA1320) (THR1326) E2
	 (GLY1344) (GLY1349) E3
	 (LEU1350) (ALA1362) E4
	 (THR1363) (LYS1373) E5
	 (SER1377) (PHE1387) E6
	 (PRO1401) (ASN1413) H7
	 (MET1420) (SER1425) E8
	 (ARG1430) (HIS1446) H9
	 (TYR1453) (ARG1463) H10
	 (GLU1470) (CYS1486) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      140.1°   E2                                                                    
E3      -93.0°   97.1°   E3                                                             
E4       87.6°  -58.7°  135.2°   E4                                                      
E5      -79.6°  137.9°  -59.6°  161.4°   E5                                               
E6      111.5°  -28.8°  106.2°  -35.3°  163.3°   E6                                        
H7      -55.3°  164.4°  -76.7°  135.2°  -27.2°  166.7°   H7                                 
E8      162.8°  -23.7°   86.8°  -80.6°  114.6°  -52.5°  140.7°   E8                          
H9      -17.3°  123.2° -101.0°   71.0°  -96.9°   94.4°  -72.3°  146.7°   H9                   
H10     117.3° -101.0°   60.1° -152.2°   37.7° -129.4°   63.5°  -77.3°  134.6°   H10           
H11     -38.5°  118.5° -131.4°   60.1° -102.1°   94.1°  -75.1°  137.8°  -32.4°  132.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2fh7a1 :  (THR1471) (CYS1651)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3sr9a1 :  (THR1430) (CYS1610)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2b49a_ :   (CYS725)  (GLU904)   [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4quna_ :   (CYS725)  (ALA882)   [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2nv5a_ :  (THR1306) (CYS1486)   [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1lara1 :  (THR1404) (THR1583)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |RPTP Lar |Human (Homo sapiens) [TaxId: 9606]
 d1larb1 :  (THR1404) (THR1583)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |RPTP Lar |Human (Homo sapiens) [TaxId: 9606]
 d4hjqa_ :   (THR331)  (LEU523)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2i1ya_ :   (THR790)  (LEU977)   [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ahsa_ :  (THR1782) (ARG1967)   [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ooqb_ :   (THR989) (LEU1167)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.45