Protein Concepts Dictionary

Tableau information

Concept source:  d1ii7a_  amino acid (a.a.) range (GLU178)(GLY307)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU178)  (GLY184) H1
	  (LEU200)  (HIS206) E2
	  (LYS209)  (THR213) E3
	  (VAL220)  (SER225) E4
	  (GLU235)  (TRP240) E5
	  (LYS246)  (VAL251) E6
	  (GLY254)  (ASP260) E7
	  (LYS262)  (GLU267) E8
	  (ARG271)  (GLY280) E9
	  (SER281)  (ILE296) H10
	  (TYR301)  (GLY307) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      -53.6°   E2                                                                    
E3      121.0°  156.6°   E3                                                             
E4      -61.3°  -35.4° -167.7°   E4                                                      
E5      -23.8°   58.6° -107.0°   79.2°   E5                                               
E6     -165.5° -118.3°   71.5° -104.8°  167.6°   E6                                        
E7      138.4° -167.3°   23.9° -146.4° -129.7°  -51.2°   E7                                 
E8      -44.5°  -29.3° -163.5°   17.2°  -62.1°  121.9°  158.5°   E8                          
E9      -40.1°   63.0°  -98.0°   90.4°  -16.4°  151.8° -121.9°  -74.2°   E9                   
H10     125.8° -127.2°   75.5°  -93.4°  145.8°  -46.4°   53.2° -106.3°  158.1°   H10           
E11     -53.8°   70.7°  -88.1°  101.6°  -30.0°  138.6° -111.7°  -86.3°  -13.8°  159.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4hd0a_ :   (ARG177)  (GLY307)   [view usage] : d.159.1.4 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |DNA double-strand break repair nuclease |Mre11 |Pyrococcus furiosus [TaxId: 2261]
 d1ii7b_ :   (GLU178)  (ARG309)   [view usage] : d.159.1.4 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |DNA double-strand break repair nuclease |Mre11 |Pyrococcus furiosus [TaxId: 2261]
 d1ii7a_ :   (GLU178)  (GLY307)   [view usage] : d.159.1.4 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |DNA double-strand break repair nuclease |Mre11 |Pyrococcus furiosus [TaxId: 2261]
 d3dsda_ :   (GLU178)  (ARG309)   [view usage] : d.159.1.4 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |DNA double-strand break repair nuclease |Mre11 |Pyrococcus furiosus [TaxId: 2261]
 d1s8ea_ :   (GLY191)  (GLY307)   [view usage] : d.159.1.4 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |DNA double-strand break repair nuclease |Mre11 |Pyrococcus furiosus [TaxId: 2261]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.159