Protein Concepts Dictionary

Tableau information

Concept source:  d1l9ta2  amino acid (a.a.) range (ALA223)(GLY324)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA223)  (ALA232) H1
	  (MET233)  (VAL237) E2
	  (LYS240)  (ASN249) E3
	  (ASP251)  (LEU256) E4
	  (GLY258)  (TYR263) E5
	  (THR272)  (ASP277) E6
	  (GLU279)  (PRO284) E7
	  (ALA287)  (GLN297) E8
	  (GLY299)  (ASN305) E9
	  (ILE309)  (GLY315) H10
	  (ALA318)  (GLY324) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2      -42.2°   E2                                                                    
E3      168.3° -148.2°   E3                                                             
E4      -13.8°  -43.1°  159.1°   E4                                                      
E5      102.5°   88.6°  -85.2°  115.4°   E5                                               
E6      -63.4°  -66.1°  112.6°  -49.7° -153.9°   E6                                        
E7      144.4°  146.8°  -34.7°  155.0°   58.9°  144.7°   E7                                 
E8      -25.5°  -42.1°  150.4°  -12.2°  123.8°  -38.2° -165.0°   E8                          
E9      163.9°  129.0°  -26.2°  172.0°  -61.7°  129.5°  -31.4°  163.1°   E9                   
H10     -90.4° -132.3°   78.6°  -90.1°  110.4°  -92.3°   71.7°  -94.6°   97.9°   H10           
E11      12.3°  -30.7° -178.6°  -20.5°   95.4°  -66.4°  146.5°  -28.8°  153.8° -102.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1j9sa2 :   (ALA223)  (GLY324)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes faecalis, strain s-6 [TaxId: 511]
 d1mzya2 :   (ALA255)  (GLY356)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Rhodobacter sphaeroides [TaxId: 1063]
 d1gs7a2 :   (THR222)  (GLY318)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes xylosoxidans [TaxId: 85698]
 d1oe2a2 :   (LYS217)  (GLY318)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes xylosoxidans [TaxId: 85698]
 d1l9sa2 :   (ALA223)  (GLY324)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes faecalis, strain s-6 [TaxId: 511]
 d1l9ra2 :   (ALA223)  (GLY324)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes faecalis, strain s-6 [TaxId: 511]
 d1l9pa2 :   (ALA223)  (GLY324)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes faecalis, strain s-6 [TaxId: 511]
 d2e86b2 :   (ALA223)  (GLY324)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Alcaligenes faecalis [TaxId: 511]
 d1wa1x2 :   (LYS217)  (GLY318)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes xylosoxidans [TaxId: 85698]
 d1aq8a2 :   (ALA223)  (GLY324)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes faecalis, strain s-6 [TaxId: 511]
 d1et7a2 :   (ALA223)  (GLY324)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes faecalis, strain s-6 [TaxId: 511]
 d1l9qa2 :   (ALA223)  (GLY324)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes faecalis, strain s-6 [TaxId: 511]
 d1l9oa2 :   (ALA223)  (GLY324)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes faecalis, strain s-6 [TaxId: 511]
 d1zdqa2 :   (ALA223)  (GLY324)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Alcaligenes faecalis [TaxId: 511]
 d2dwta2 :   (ALA255)  (GLY356)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Rhodobacter sphaeroides [TaxId: 1063]
 d1et8a2 :   (ALA223)  (GLY324)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes faecalis, strain s-6 [TaxId: 511]
 d1bq5a2 :   (LYS223)  (GLY324)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes xylosoxidans [TaxId: 85698]
 d1l9ta2 :   (ALA223)  (GLY324)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes faecalis, strain s-6 [TaxId: 511]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.6