Protein Concepts Dictionary

Tableau information

Concept source:  d3wjfa_  amino acid (a.a.) range (ALA21)(ASP164)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA21)   (LEU26) H1
	   (GLY28)   (TYR38) E2
	   (PRO42)   (GLY56) E3
	   (PRO58)   (LYS68) E4
	   (LEU76)   (PRO86) E5
	   (GLY88)   (ILE94) E6
	   (GLY99)  (ASN109) E7
	  (GLN113)  (SER119) E8
	  (LYS129)  (LEU137) E9
	  (TYR144)  (THR150) E10
	  (LEU158)  (ASP164) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
E2       72.6°   E2                                                                    
E3     -137.6°  147.2°   E3                                                             
E4       16.5°  -56.2°  153.5°   E4                                                      
E5      154.7°  111.9°  -48.5°  152.9°   E5                                               
E6      -45.8°  -74.7°  115.0°  -47.8°  158.7°   E6                                        
E7      122.0°  108.8°  -69.4°  122.8°  -32.7°  166.7°   E7                                 
E8      -89.9°  -49.0°  108.4°  -79.5°  112.0°  -55.9°  136.1°   E8                          
E9       89.7°  135.0°  -69.2°  101.1°  -69.4°  121.2°  -47.1°  175.5°   E9                   
E10     -90.7°  -37.4°  115.7°  -77.6°  107.8°  -64.4°  126.3°  -13.3°  171.2°   E10           
E11      89.4°  154.7°  -56.4°  104.7°  -77.2°  105.7°  -65.5°  151.5°  -24.0°  164.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3emma_ :    (ALA21)  (ASP164)   [view usage] : b.60.1.8 |Lipocalins |Lipocalins |Rv2717c-like |Hypothetical protein At1g79260 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d3wjea_ :    (ALA21)  (ASP164)   [view usage] : b.60.1.8 |Lipocalins |Lipocalins |Rv2717c-like |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d3wjga_ :    (ALA21)  (ASP164)   [view usage] : b.60.1.8 |Lipocalins |Lipocalins |Rv2717c-like |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d3wjeb_ :    (ALA21)  (ILE162)   [view usage] : b.60.1.8 |Lipocalins |Lipocalins |Rv2717c-like |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d3wjda_ :    (ALA21)  (ASP164)   [view usage] : b.60.1.8 |Lipocalins |Lipocalins |Rv2717c-like |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d2a13a1 :    (ALA21)  (ASP164)   [view usage] : b.60.1.8 |Lipocalins |Lipocalins |Rv2717c-like |Hypothetical protein At1g79260 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d3wjfa_ :    (ALA21)  (ASP164)   [view usage] : b.60.1.8 |Lipocalins |Lipocalins |Rv2717c-like |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.60