Protein Concepts Dictionary

Tableau information

Concept source:  d1h47a_  amino acid (a.a.) range (GLU0)(LYS156)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHHHEEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLU0)   (ALA11) E1
	   (ASP38)   (ALA53) H2
	   (ASP65)   (ALA71) H3
	   (SER73)   (GLY88) H4
	   (GLY88)   (LEU91) E5
	   (GLY92)  (ALA100) E6
	  (MET105)  (ILE109) H7
	  (ILE109)  (GLY121) H8
	  (ASP126)  (THR134) E9
	  (GLY138)  (GLY143) H10
	  (GLY145)  (LYS156) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2      148.8°   H2                                                                    
H3      -74.0°  135.2°   H3                                                             
H4      162.0°   13.3°  123.0°   H4                                                      
E5      -58.0°  135.5°  -36.4°  131.3°   E5                                               
E6      -19.2°  142.7°  -70.4°  153.1°  -44.5°   E6                                        
H7      145.9°  -54.1°   99.5°  -44.2° -132.2°  162.7°   H7                                 
H8      131.0°  -36.5°  141.6°  -39.6° -170.8°  143.4°  -42.6°   H8                          
E9      -37.8°  124.8°  -78.4°  133.7°   44.6°  -19.9° -175.3°  139.9°   E9                   
H10      54.2° -151.7°  -43.0° -141.5°  -63.8°  -65.0°   97.9°  121.6°  -83.5°   H10           
E11     165.7°  -33.4°  110.5°  -22.2°  133.5°  174.8°  -22.3°  -38.1°  155.0° -119.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1h47b_ :     (GLU0)  (LYS156)   [view usage] : d.79.5.1 |Bacillus chorismate mutase-like |IpsF-like |IpsF-like |2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |Escherichia coli [TaxId: 562]
 d1h48c_ :    (LEU-1)  (LYS156)   [view usage] : d.79.5.1 |Bacillus chorismate mutase-like |IpsF-like |IpsF-like |2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |Escherichia coli [TaxId: 562]
 d1gx1a_ :     (GLU0)  (LYS156)   [view usage] : d.79.5.1 |Bacillus chorismate mutase-like |IpsF-like |IpsF-like |2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |Escherichia coli [TaxId: 562]
 d1h47a_ :     (GLU0)  (LYS156)   [view usage] : d.79.5.1 |Bacillus chorismate mutase-like |IpsF-like |IpsF-like |2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.79