Protein Concepts Dictionary

Tableau information

Concept source:  d2xw6a_  amino acid (a.a.) range (ALA3)(LEU123)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHHEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ALA3)    (HIS9) E1
	   (LYS13)   (HIS23) H2
	   (HIS23)   (ARG29) H3
	   (PRO31)   (THR35) E4
	   (THR37)   (GLY47) H5
	   (THR49)   (LEU54) E6
	   (GLY60)   (GLY71) H7
	   (LEU74)   (ARG80) E8
	   (GLN93)  (HIS102) H9
	  (VAL104)  (ASN109) E10
	  (PRO110)  (LEU123) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2      145.3°   H2                                                                    
H3     -131.7°  -82.5°   H3                                                             
E4      -26.7° -170.5°  105.0°   E4                                                      
H5      106.4°  -40.5° -117.2°  130.1°   H5                                               
E6      -55.6°  159.0°   77.1°  -30.0° -159.0°   E6                                        
H7     -149.8°   45.1°   59.3° -143.9°   83.5°  117.6°   H7                                 
E8       -5.3°  140.0° -136.8°  -31.8°  101.2°  -61.0° -150.0°   E8                          
H9     -155.0°   39.5°   59.3°  149.8°  -78.6°  122.4°    6.3° -154.5°   H9                   
E10     -33.8°  111.7° -161.2°  -59.7°   72.8°  -89.3°  139.5°  -28.5° -139.3°   E10           
H11    -168.7°  -27.7°   55.2°  157.9°  -63.9°  132.3°   39.0° -164.2°   33.1° -136.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wo8b_ :     (ALA3)  (LYS122)   [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Thermus thermophilus [TaxId: 274]
 d1egha_ :    (HIS13)  (SER129)   [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Escherichia coli [TaxId: 562]
 d1s89a_ :    (HIS13)  (SER129)   [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Escherichia coli [TaxId: 562]
 d1vmda_ :    (ARG17)  (SER133)   [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Thermotoga maritima [TaxId: 2336]
 d1b93b_ :    (HIS13)  (ASP134)   [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Escherichia coli [TaxId: 562]
 d2xw6b_ :     (ALA3)  (VAL124)   [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |automated matches |Thermus sp. [TaxId: 405418]
 d1wo8e_ :     (ALA3)  (GLY123)   [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Thermus thermophilus [TaxId: 274]
 d1b93c_ :    (HIS13)  (SER129)   [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Escherichia coli [TaxId: 562]
 d2xw6c_ :     (ALA3)  (VAL124)   [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |automated matches |Thermus sp. [TaxId: 405418]
 d1s8aa_ :    (HIS13)  (SER129)   [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Escherichia coli [TaxId: 562]
 d2xw6a_ :     (ALA3)  (LEU123)   [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |automated matches |Thermus sp. [TaxId: 405418]
 d1wo8a1 :     (ALA3)  (LYS122)   [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Thermus thermophilus [TaxId: 274]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.24