Protein Concepts Dictionary

Tableau information

Concept source:  d2z2ia_  amino acid (a.a.) range (PRO4)(GLY136)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHHEEEHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO4)   (LEU10) E1
	   (GLY14)   (THR20) H2
	   (LEU24)   (LEU36) H3
	   (GLY37)   (ALA42) E4
	   (ALA48)   (THR52) E5
	   (SER59)   (LYS64) E6
	   (TYR68)   (TYR83) H7
	   (ILE90)   (HIS94) E8
	  (GLY102)  (LEU106) E9
	  (HIS115)  (GLY126) H10
	  (PHE130)  (GLY136) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2       99.3°   H2                                                                    
H3     -137.4°  -87.9°   H3                                                             
E4      -74.2°  135.4°  127.1°   E4                                                      
E5      133.2°  -58.8°   29.3°  151.3°   E5                                               
E6      -17.9°  114.2° -142.2°  -56.7°  149.1°   E6                                        
H7      171.4°  -87.2°   36.6°  105.1°  -46.4°  158.1°   H7                                 
E8      -19.1°   85.2°  124.4°  -93.3°  114.5°  -36.9°  160.0°   E8                          
E9      147.4°   88.0°  -74.2°   78.4°  -77.5°  133.4°  -37.6°  159.8°   E9                   
H10     144.7° -102.4°  -71.3°   70.8°  -82.1°  127.5°  -36.7° -163.2°  -14.9°   H10           
E11     -36.0°   75.6°  109.1° -110.1°   97.3°  -53.4°  143.1°  -17.2°  162.9° -177.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3td2a_ :     (PRO4)  (GLY136)   [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3wh4a_ :     (SER5)  (ILE134)   [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 575584]
 d4fopa_ :     (SER5)  (GLY135)   [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 575584]
 d4qt4a_ :     (MET1)  (GLY136)   [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 471876]
 d4olja_ :     (SER5)  (GLY135)   [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 575584]
 d2z2jb_ :     (PRO4)  (GLY136)   [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d2z2ja_ :     (PRO4)  (GLY136)   [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3tcnb_ :     (PRO4)  (ILE135)   [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d2z2ia_ :     (PRO4)  (GLY136)   [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3tcka_ :     (PRO4)  (ILE135)   [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.56