Protein Concepts Dictionary

Tableau information

Concept source:  d2uyha_  amino acid (a.a.) range (LYS162)(PHE324)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHHEEEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS162)  (ARG172) E1
	  (PHE191)  (LEU196) H2
	  (VAL202)  (VAL206) H3
	  (ASP211)  (ASN216) E4
	  (LYS225)  (GLY230) E5
	  (GLU239)  (SER243) E6
	  (ILE247)  (ALA253) E7
	  (GLY263)  (ASN268) E8
	  (HIS275)  (GLY284) H9
	  (SER294)  (SER305) H10
	  (ILE308)  (PHE324) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2       90.3°   H2                                                                    
H3      129.5° -118.8°   H3                                                             
E4      -74.5° -128.2° -108.3°   E4                                                      
E5      144.5°  -75.7°  -44.3°  139.3°   E5                                               
E6      -88.1°  -98.8° -122.6°  -33.4°  125.8°   E6                                        
E7       66.4°   61.2°   91.3°  140.1°  -78.3° -146.0°   E7                                 
E8     -128.6°  -78.2°  -98.9°  -74.5°   80.9°  -46.1° -137.7°   E8                          
H9      -49.9°  132.9° -107.1°   31.4° -151.2°   61.5° -110.4°  105.6°   H9                   
H10      59.9°  146.2°  -93.8°   34.0° -137.8°   67.1° -113.2°  107.0°   13.4°   H10           
H11     -21.4°  105.5°  128.2°   53.2° -162.9°   71.1°  -87.3°  116.1°  -29.9°   41.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2uyha_ :   (LYS162)  (PHE324)   [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |automated matches |Haemophilus haemolyticus [TaxId: 726]
 d2uz4a_ :   (LYS162)  (LEU322)   [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |automated matches |Haemophilus parahaemolyticus [TaxId: 735]
 d2z6ua_ :   (LYS162)  (ASN323)   [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |DNA methylase HhaI |Haemophilus parahaemolyticus [TaxId: 735]
 d2zcja_ :   (LYS162)  (PHE324)   [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |DNA methylase HhaI |Haemophilus parahaemolyticus [TaxId: 735]
 d2z6aa_ :   (LYS162)  (PHE324)   [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |DNA methylase HhaI |Haemophilus parahaemolyticus [TaxId: 735]
 d2i9ka_ :   (LYS162)  (PHE324)   [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |DNA methylase HhaI |Haemophilus haemolyticus [TaxId: 726]
 d2uyca_ :   (LYS162)  (ASN323)   [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |automated matches |Haemophilus haemolyticus [TaxId: 726]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66