Protein Concepts Dictionary

Tableau information

Concept source:  d1l4ua_  amino acid (a.a.) range (LYS4)(GLY112)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHEHHHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS4)   (LEU10) E1
	   (LYS15)   (GLY27) H2
	   (GLY29)   (THR33) E3
	   (THR33)   (GLY42) H4
	   (SER44)   (GLY53) H5
	   (GLN55)   (HIS72) H6
	   (GLY74)   (GLY79) E7
	   (GLY79)   (SER85) H8
	   (PRO86)   (LEU92) H9
	   (VAL97)  (SER103) E10
	  (SER103)  (GLY112) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2      164.9°   H2                                                                    
E3      -41.4°  153.7°   E3                                                             
H4      -95.0°  -93.9°  -72.5°   H4                                                      
H5      -66.0°  128.8°  -25.5°   69.5°   H5                                               
H6      152.5°   16.0° -157.7°  110.0°  133.0°   H6                                        
E7      -17.9° -176.4°  -23.9°  -82.6°  -49.2° -167.4°   E7                                 
H8      -95.3°   96.8°   61.8°   90.4°   38.7°  -95.9°   82.5°   H8                          
H9     -145.5°   24.8° -153.3°  118.5°  131.2°    8.9° -158.6°  -92.8°   H9                   
E10     -29.1°  135.9°  -70.4° -112.0°  -94.4°  125.2°  -46.9° -117.2° -120.3°   E10           
H11     -96.7°   82.0° -100.5°  -41.7° -108.1°   94.6°  -95.8° -131.3°  102.8°   94.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2iyxa_ :     (LYS4)  (ARG110)   [view usage] : c.37.1.2 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Shikimate kinase (AroK) |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1zyua_ :     (LYS4)  (GLY112)   [view usage] : c.37.1.2 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Shikimate kinase (AroK) |Shikimate kinase (AroK) |Mycobacterium tuberculosis [TaxId: 1773]
 d3trfa_ :     (ASN7)  (GLN117)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
 d2iyqa_ :     (LYS4)  (GLY112)   [view usage] : c.37.1.2 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Shikimate kinase (AroK) |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d2iywa_ :     (LYS4)  (ARG110)   [view usage] : c.37.1.2 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Shikimate kinase (AroK) |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1e6ca_ :     (PRO4)  (LEU115)   [view usage] : c.37.1.2 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Shikimate kinase (AroK) |Shikimate kinase (AroK) |Erwinia chrysanthemi [TaxId: 556]
 d1viaa_ :     (ASN6)  (ARG109)   [view usage] : c.37.1.2 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Shikimate kinase (AroK) |Shikimate kinase (AroK) |Campylobacter jejuni [TaxId: 197]
 d1l4ua_ :     (LYS4)  (GLY112)   [view usage] : c.37.1.2 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Shikimate kinase (AroK) |Shikimate kinase (AroK) |Mycobacterium tuberculosis [TaxId: 1773]
 d2iyua_ :     (LYS4)  (GLY113)   [view usage] : c.37.1.2 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Shikimate kinase (AroK) |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d2iysa_ :     (LYS4)  (ARG110)   [view usage] : c.37.1.2 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Shikimate kinase (AroK) |automated matches |Mycobacterium tuberculosis [TaxId: 83332]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37