Protein Concepts Dictionary

Tableau information

Concept source:  d1kyya_  amino acid (a.a.) range (ARG19)(LEU158)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG19)   (ALA25) E1
	   (ASN28)   (ASP48) H2
	   (ILE54)   (PRO60) E3
	   (GLY61)   (LEU65) H4
	   (LEU65)   (ASN76) H5
	   (ASP79)   (LYS89) E6
	   (MET93)  (GLY114) H7
	  (VAL115)  (LEU119) E8
	  (GLY120)  (VAL124) E9
	  (GLU127)  (GLY135) H10
	  (GLY143)  (LEU158) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2      169.2°   H2                                                                    
E3      -19.1°  167.3°   E3                                                             
H4     -151.0°   33.0°  134.4°   H4                                                      
H5      154.6°  -35.4°  142.8°  -42.1°   H5                                               
E6      -14.7°  154.5°  -31.6° -150.3°  166.7°   E6                                        
H7      163.0°  -27.4°  144.4°   24.0°  -18.1° -173.5°   H7                                 
E8      -41.7°  127.7°  -59.4° -142.9°  153.2°  -27.8° -155.2°   E8                          
E9      -23.6°  146.2°  -36.6° -140.5°  177.4°   10.8° -164.5°  -25.8°   E9                   
H10    -159.9°   15.4° -176.4°   47.7°  -35.6° -148.7°  -35.9°  121.1°  144.8°   H10           
H11     140.1°  -48.3°  121.0°   21.8°  -37.8°  148.9°  -25.0°  160.9°  144.3°   60.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1kz4a_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kz9c_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kyva_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kz9a_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kz4c_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kz4e_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kz9e_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kyya_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kz1a_ :    (ARG19)  (ALA157)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.16