Protein Concepts Dictionary

Tableau information

Concept source:  d3sesa_  amino acid (a.a.) range (GLY6)(ASN119)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHHHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLY6)   (ILE12) E1
	   (GLY17)   (GLY33) H2
	   (ILE34)   (HIS40) E3
	   (LYS43)   (GLY55) H4
	   (ASP59)   (TRP63) E5
	   (HIS65)   (PHE68) H6
	   (PHE68)   (GLY75) H7
	   (ASP83)   (LYS89) H8
	   (PRO92)   (VAL98) H9
	  (ALA110)  (LEU114) E10
	  (SER115)  (ASN119) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2      167.8°   H2                                                                    
E3      -21.8°  168.6°   E3                                                             
H4     -147.6°  -36.0°  133.1°   H4                                                      
E5      -14.6°  153.4°  -36.1° -149.1°   E5                                               
H6      100.6°  -78.0°   94.6°  -48.5°  100.8°   H6                                        
H7      138.0°  -46.8°  122.1°  -11.1°  142.8°  -43.0°   H7                                 
H8      -27.3°  152.2°  -38.0° -169.9°  -30.6° -127.9° -159.0°   H8                          
H9       95.6°  -93.8°   74.8°  -61.7°  108.3°   58.2°  -51.0°  108.2°   H9                   
E10     -18.6° -173.1°  -11.3° -143.5°  -32.7° -105.5°  132.4°  -27.1°   83.3°   E10           
E11     -67.3°  116.2°  -70.1°  140.0°  -70.3° -163.7°  141.5°   40.5° -110.6°  -59.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3hstc_ :    (GLY13)  (ASN126)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3sesc_ :     (GLY6)  (ASN119)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d3q28a_ :     (GLY6)  (ASN119)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli [TaxId: 562]
 d1ytva_ :    (GLY19)  (ASN132)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d3hpia_ :     (GLY5)  (ASN118)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli K-12 [TaxId: 83333]
 d3hsta_ :    (LYS14)  (ASN126)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3lbsb_ :     (LYS6)  (LYS119)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli [TaxId: 562]
 d3sesa_ :     (GLY6)  (ASN119)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d1y4ca1 :     (GLY5)  (ASN118)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d3seua_ :     (GLY6)  (ASN119)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d3q29a_ :     (GLY6)  (ASN119)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.94