Protein Concepts Dictionary

Tableau information

Concept source:  d2foxa_  amino acid (a.a.) range (MET1)(ASN137)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)    (TRP6) E1
	   (GLY10)   (SER26) H2
	   (LYS28)   (ASN34) E3
	   (ASN39)   (ASN45) H4
	   (ASP47)   (CYS53) E5
	   (GLU62)   (ILE73) H6
	   (LYS81)   (TRP90) E7
	   (GLY93)  (TYR106) H8
	  (GLY107)  (GLU112) E9
	  (PRO114)  (GLN118) E10
	  (GLN126)  (ASN137) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2      174.6°   H2                                                                    
E3      -18.8° -166.5°   E3                                                             
H4     -136.5°   39.3° -150.8°   H4                                                      
E5      -23.1°  152.5°  -39.3° -125.9°   E5                                               
H6     -137.8°   45.4°  126.2°  -56.3° -158.3°   H6                                        
E7      -32.1°  143.3°  -48.4°  119.0°   -9.2° -163.1°   E7                                 
H8      128.6°  -56.0°  112.6°  -75.5°  151.5°  -19.8°  160.6°   H8                          
E9      -95.1°   80.3° -110.5°   70.7°  -72.2°  122.7°  -63.1° -136.3°   E9                   
E10     -45.5°  131.2°  -57.5°  120.3°  -24.2°  176.2°  -18.2°  163.0°   53.5°   E10           
H11     134.4°  -49.9°  119.5°   67.4°  157.3°   12.1°  165.9°   -8.0°  129.9° -170.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2foxa_ :     (MET1)  (ASN137)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Clostridium beijerinckii [TaxId: 1520]
 d1flaa_ :     (MET1)  (ASN137)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Clostridium beijerinckii [TaxId: 1520]
 d3kapa_ :     (LYS3)  (LYS147)   [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Desulfovibrio desulfuricans [TaxId: 525146]
 d2faxa_ :     (MET1)  (ALA137)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Clostridium beijerinckii [TaxId: 1520]
 d1fvxa_ :     (MET1)  (ASN137)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Clostridium beijerinckii [TaxId: 1520]
 d1e5da1 :   (ASN253)  (ALA401)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain |Desulfovibrio gigas [TaxId: 879]
 d1flda_ :     (MET1)  (ILE138)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Clostridium beijerinckii [TaxId: 1520]
 d1flna_ :     (MET1)  (ASN137)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Clostridium beijerinckii [TaxId: 1520]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23