Protein Concepts Dictionary

Tableau information

Concept source:  d3f8za_  amino acid (a.a.) range (LEU4)(MET139)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU4)    (ALA9) E1
	   (LEU27)   (THR38) H2
	   (ASN48)   (GLY53) E3
	   (GLY53)   (SER59) H4
	   (ILE71)   (SER76) E5
	   (HIS87)   (ARG91) E6
	   (SER92)  (GLN102) H7
	  (GLN102)  (LYS108) H8
	  (MET111)  (GLY116) E9
	  (SER118)  (HIS127) H10
	  (HIS130)  (MET139) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2     -174.1°   H2                                                                    
E3      -65.8°  115.0°   E3                                                             
H4       51.1° -124.7°  109.4°   H4                                                      
E5      -79.2°  102.3°  -14.2° -123.6°   E5                                               
E6      -99.8°   84.0°  -45.2° -150.8°  -32.6°   E6                                        
H7      125.1°  -51.8°  156.7°  -74.5°  150.4°  134.7°   H7                                 
H8       69.6° -112.0° -128.0°   55.4° -135.3° -123.3°  -73.7°   H8                          
E9      -45.3° -135.4°  -20.6°   90.9°  -34.3°  -61.2°  159.3°  110.3°   E9                   
H10    -137.9°   47.4°  118.2° -128.7°  105.3°   73.1°  -69.4°  -79.9° -131.0°   H10           
E11      -4.5°  173.1°  -70.1°   48.4°  -83.3° -102.8°  121.7°   65.3°  -49.5° -135.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1u71a_ :     (LEU4)  (MET139)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d3ghva_ :     (LEU4)  (MET139)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d1boza_ :     (LEU4)  (GLN140)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d2w3ba_ :     (GLY2)  (MET139)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d1hfqa_ :     (LEU4)  (MET139)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d3vcoa_ :     (VAL7)  (LEU136)   [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
 d1kmsa_ :     (SER3)  (MET139)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d3f8za_ :     (LEU4)  (MET139)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d1dhfa_ :     (LEU4)  (MET139)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d3eiga_ :     (LEU4)  (GLN140)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d1dlsa_ :     (LEU4)  (MET139)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d1u70a_ :    (MET14)  (GLN140)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Mouse (Mus musculus) [TaxId: 10090]
 d4m6ja_ :     (LEU4)  (MET139)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.71