Protein Concepts Dictionary

Tableau information

Concept source:  d1ws7d_  amino acid (a.a.) range (MET1)(VAL102)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHEEEHEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)    (VAL7) E1
	   (TYR21)   (SER27) H2
	   (SER27)   (VAL32) E3
	   (GLY33)   (ASN39) E4
	   (HIS45)   (GLN49) E5
	   (GLN52)   (CYS58) H6
	   (ALA64)   (SER69) E7
	   (ASP72)   (ARG78) E8
	   (GLY80)   (CYS86) E9
	   (GLY90)   (GLY95) H10
	   (GLN96)  (VAL102) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2      164.4°   H2                                                                    
E3     -129.8°  -65.8°   E3                                                             
E4      -29.3°  145.7° -127.7°   E4                                                      
E5      130.4°  -55.7°  -52.3°  158.5°   E5                                               
H6       31.3° -135.5°  150.4°   22.7° -151.7°   H6                                        
E7      -83.4°   90.9°  112.0°  -55.3°  146.1°  -57.2°   E7                                 
E8      127.1°  -53.9°  -67.1°  155.9°   15.5° -139.5°  143.0°   E8                          
E9      -35.9°  144.3°  116.4°  -11.5°  156.2°   34.0°  -54.3°  161.8°   E9                   
H10     108.3°  -57.7° -117.0°  114.7°  -73.3°  -92.2°   95.0°  -58.5°  125.4°   H10           
E11     160.1°  -22.7°  -55.8°  168.4°  -33.1° -152.2°  113.3°  -33.3°  164.1°  -61.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1x9rb_ :     (MET0)  (GLY103)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Horseradish (Armoracia rusticana) [TaxId: 3704]
 d1ws7b_ :     (MET1)  (VAL102)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Mavicyanin |Zucchini (Cucurbita pepo) [TaxId: 3663]
 d1ws7d_ :     (MET1)  (VAL102)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Mavicyanin |Zucchini (Cucurbita pepo) [TaxId: 3663]
 d1x9ra_ :     (MET0)  (GLY103)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Horseradish (Armoracia rusticana) [TaxId: 3704]
 d1ws7a_ :     (MET1)  (VAL102)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Mavicyanin |Zucchini (Cucurbita pepo) [TaxId: 3663]
 d1ws8a_ :     (MET1)  (VAL102)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Mavicyanin |Zucchini (Cucurbita pepo) [TaxId: 3663]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.6