Protein Concepts Dictionary

Tableau information

Concept source:  d4ghgc1  amino acid (a.a.) range (ALA19)(TYR145)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA19)   (VAL24) E1
	   (LEU28)   (GLY40) H2
	   (SER44)   (GLU48) E3
	   (ASN49)   (SER55) E4
	   (ASN63)   (LYS68) E5
	   (MET77)   (ARG82) E6
	   (ASP86)   (GLY98) H7
	  (ARG100)  (ASP106) E8
	  (ASP114)  (GLU119) E9
	  (PRO125)  (PHE129) E10
	  (LEU138)  (TYR145) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2      144.5°   H2                                                                    
E3       -9.9° -154.2°   E3                                                             
E4      151.6°   15.3° -160.8°   E4                                                      
E5       -8.1° -151.7°   -3.1°  159.7°   E5                                               
E6      152.5°  -57.6°  144.2°  -55.0°  144.8°   E6                                        
H7      -58.9°  126.7°  -57.2°  114.8°  -59.8°  128.8°   H7                                 
E8      104.9°  -71.6°  105.1°  -83.8°  102.8°  -61.1° -161.4°   E8                          
E9      -60.8°  110.8°  -63.4°  102.6°  -65.0°  138.2°   22.2°  159.6°   E9                   
E10     136.6°  -58.2°  132.9°  -63.2°  131.7°  -25.1° -152.1°  -35.9°  162.3°   E10           
H11      52.8°  -92.2°  -62.1° -103.3°   59.4°  137.4°  -92.9°   82.2°  -77.5°  114.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1f1ra1 :    (ALA19)  (ARG141)   [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |Homoprotocatechuate 2,3-dioxygenase |Arthrobacter globiformis [TaxId: 1665]
 d1f1va1 :    (ALA19)  (ARG141)   [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |Homoprotocatechuate 2,3-dioxygenase |Arthrobacter globiformis [TaxId: 1665]
 d4ghga1 :    (ALA19)  (TYR145)   [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |Homoprotocatechuate 2,3-dioxygenase |Brevibacterium fuscum [TaxId: 47914]
 d1f1ua1 :    (ALA19)  (TYR145)   [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |Homoprotocatechuate 2,3-dioxygenase |Arthrobacter globiformis [TaxId: 1665]
 d4ghgc1 :    (ALA19)  (TYR145)   [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |Homoprotocatechuate 2,3-dioxygenase |Brevibacterium fuscum [TaxId: 47914]
 d1f1xa1 :    (ALA19)  (TYR145)   [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |Homoprotocatechuate 2,3-dioxygenase |Brevibacterium fuscum [TaxId: 47914]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.32