Protein Concepts Dictionary

Tableau information

Concept source:  d3m0na_  amino acid (a.a.) range (ASN45)(ASN171)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEEHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN45)   (ARG51) E1
	   (PHE63)   (ASP78) H2
	   (PHE81)   (TYR86) E3
	   (VAL89)   (GLU94) E4
	   (ASP97)  (CYS103) E5
	  (SER107)  (PHE111) E6
	  (ASP115)  (PRO120) E7
	  (SER125)  (ASP142) H8
	  (ASP142)  (SER150) H9
	  (TYR153)  (SER159) E10
	  (LYS165)  (ASN171) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2      144.9°   H2                                                                    
E3       55.5°   89.9°   E3                                                             
E4     -106.2°   81.4° -114.6°   E4                                                      
E5       88.0°  -81.1°   64.9°  162.5°   E5                                               
E6      -78.1°  118.0° -115.9°  -36.9°  160.4°   E6                                        
E7       36.8° -111.1°  -23.4° -125.7°   61.2° -111.0°   E7                                 
H8      -56.0°  128.3°   92.0°  -51.4°  144.0°  -24.8°   86.4°   H8                          
H9      -44.3° -155.8°  -89.4°  120.6°  -76.7°   83.7°  -66.1°   75.9°   H9                   
E10     162.6°  -44.6° -126.5°   88.8°  -79.2°  111.1° -137.9°  135.4°  120.3°   E10           
E11     -30.8°  123.0°   50.0°  -82.3°  106.9°  -67.1°   45.8°  -42.4°  -73.5°  166.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3lzea_ :    (ASN45)  (ASN171)   [view usage] : d.96.1.2 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |6-pyruvoyl tetrahydropterin synthase |automated matches |Plasmodium vivax [TaxId: 5855]
 d1y13a_ :    (LEU40)  (TYR172)   [view usage] : d.96.1.2 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |6-pyruvoyl tetrahydropterin synthase |6-pyruvoyl tetrahydropterin synthase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d3m0na_ :    (ASN45)  (ASN171)   [view usage] : d.96.1.2 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |6-pyruvoyl tetrahydropterin synthase |automated matches |Plasmodium vivax [TaxId: 5855]
 d2a0sa1 :    (LEU47)  (ASN179)   [view usage] : d.96.1.2 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |6-pyruvoyl tetrahydropterin synthase |6-pyruvoyl tetrahydropterin synthase |Plasmodium vivax [TaxId: 5855]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.96