Tableau information
Concept source: d1ge8a2 amino acid (a.a.) range (THR131)(LEU243)
nSSEs in this Concept: 11
String of secondary struct.elems. (SSEs) defining this concept: EHEEEEEHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR131) (VAL135) E1
(GLY138) (VAL151) H2
(ASP153) (ALA159) E3
(ASN162) (GLU171) E4
(THR172) (LEU181) E5
(LEU187) (GLN192) E6
(GLU194) (GLY200) E7
(VAL201) (LYS209) H8
(ASP215) (PHE221) E9
(PRO226) (TYR232) E10
(GLY237) (LEU243) E11
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 111.6° H2
E3 101.1° 135.3° E3
E4 -94.3° -22.1° 157.2° E4
E5 81.1° -164.3° -29.4° 173.5° E5
E6 176.5° -71.8° -75.5° 89.2° -95.3° E6
E7 -69.3° -62.2° 162.2° -40.6° 132.9° 113.7° E7
H8 -40.8° -147.4° 76.1° -125.7° 48.1° 136.3° 87.4° H8
E9 170.9° 59.8° -84.9° 78.0° -106.9° -12.3° 106.7° 148.3° E9
E10 -26.8° -136.4° 83.6° -116.3° 58.1° 150.2° -81.8° -14.2° 162.4° E10
E11 137.8° 30.6° -105.8° 52.3° -133.9° -45.2° 90.7° 178.0° -33.1° 164.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3aizc2 : (PRO129) (ALA242) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d1iz4a2 : (THR131) (ALA244) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |Proliferating cell nuclear antigen (PCNA) |Pyrococcus furiosus [TaxId: 2261]
d1sxjg2 : (ASP134) (ALA251) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |Proliferating cell nuclear antigen (PCNA) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1iz5a2 : (THR131) (ALA244) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |Proliferating cell nuclear antigen (PCNA) |Pyrococcus furiosus [TaxId: 2261]
d3ifvc2 : (ALA128) (MET239) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |Proliferating cell nuclear antigen (PCNA) |Haloferax volcanii [TaxId: 2246]
d1ge8a2 : (THR131) (LEU243) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |Proliferating cell nuclear antigen (PCNA) |Pyrococcus furiosus [TaxId: 2261]
d3lx2a2 : (THR131) (ALA245) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Thermococcus kodakarensis [TaxId: 311400]
d3lx1a2 : (THR131) (LEU243) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Thermococcus kodakarensis [TaxId: 311400]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.131