Protein Concepts Dictionary

Tableau information

Concept source:  d4pn3c_  amino acid (a.a.) range (GLY141)(ALA254)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEHHEHHHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY141)  (THR146) E1
	  (PHE152)  (ILE156) E2
	  (ALA159)  (MET171) H3
	  (LEU173)  (LEU179) H4
	  (GLY183)  (ILE193) E5
	  (THR196)  (GLY201) H6
	  (GLN204)  (SER213) H7
	  (PRO223)  (GLU235) H8
	  (ASN236)  (GLU242) H9
	  (GLU242)  (ASP247) E10
	  (ALA249)  (ALA254) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2       30.6°   E2                                                                    
H3     -157.4° -170.6°   H3                                                             
H4      174.9°  145.3°  -27.2°   H4                                                      
E5      -19.0°   37.4° -152.0°  157.9°   E5                                               
H6       26.7°   34.5° -153.9° -149.2°   10.9°   H6                                        
H7      112.5°  138.4°  -46.1°  -72.5°  117.9°  127.9°   H7                                 
H8      150.0° -153.9°   19.5°  -34.9°  159.6°  168.7°   41.7°   H8                          
H9       51.4°  -48.1° -128.2° -130.0°   70.1°   74.8°   98.0° -108.8°   H9                   
E10     -37.6°   46.5°  141.4°  139.0°  -18.9°  -12.8° -124.8°  159.1°  -87.3°   E10           
E11      46.3°   31.3° -142.4°  132.9°   62.1°   63.3°  117.8° -123.1°  -19.8°   76.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4pn3g_ :   (GLY141)  (ALA254)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Brucella melitensis [TaxId: 1160220]
 d4o5ob_ :   (GLY141)  (ALA254)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Brucella suis [TaxId: 204722]
 d4pn3a_ :   (GLY141)  (ALA254)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Brucella melitensis [TaxId: 1160220]
 d4pn3e_ :   (GLY141)  (ALA254)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Brucella melitensis [TaxId: 1160220]
 d4pn3c_ :   (GLY141)  (ALA254)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Brucella melitensis [TaxId: 1160220]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2