Protein Concepts Dictionary

Tableau information

Concept source:  d2gj8b_  amino acid (a.a.) range (VAL254)(MSE376)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEHEHHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL254)  (ASP262) E1
	  (PRO265)  (THR271) E2
	  (ASP279)  (ALA296) H3
	  (ARG298)  (ASP304) E4
	  (ASP312)  (TRP317) H5
	  (PRO318)  (LEU324) H6
	  (PRO329)  (ARG334) E7
	  (LYS336)  (GLY341) H8
	  (GLY345)  (ASN350) E9
	  (ALA353)  (LEU357) E10
	  (VAL365)  (MSE376) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      149.5°   E2                                                                    
H3      -35.5° -147.6°   H3                                                             
E4      111.5°  -41.4° -136.6°   E4                                                      
H5      164.1°   32.5° -158.3°   61.5°   H5                                               
H6      -74.2°  134.5°  -51.2°  172.0°  111.5°   H6                                        
E7       99.2°  -57.1°  130.5°  -17.3°   70.4°  160.7°   E7                                 
H8      -78.2°   71.7°  -91.3°   46.4°  102.3° -141.6°   49.9°   H8                          
E9     -111.3°   73.7°  -78.8°  105.2°  -84.7°  -77.0°  122.0°   89.0°   E9                   
E10     100.0°  -70.9°  135.0°  -45.6°   64.6°  129.2°  -32.9°  -81.3°  144.6°   E10           
H11     -78.8°  121.3°   45.1°  156.8° -113.3°  -27.2°  170.9°  121.1°  -51.9° -156.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2gj8d_ :   (VAL254)  (GLY377)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Escherichia coli [TaxId: 469008]
 d2gj8a_ :   (VAL254)  (GLN374)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Escherichia coli [TaxId: 469008]
 d2gjab_ :   (ASP253)  (GLN374)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Escherichia coli [TaxId: 469008]
 d2gj8b_ :   (VAL254)  (MSE376)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Escherichia coli [TaxId: 469008]
 d2gjaa_ :   (VAL254)  (GLN374)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Escherichia coli [TaxId: 469008]
 d2gj9a_ :   (VAL254)  (GLN374)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Escherichia coli [TaxId: 469008]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37