Protein Concepts Dictionary

Tableau information

Concept source:  d4wcza_  amino acid (a.a.) range (LEU3)(GLY130)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEHEHHEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU3)    (GLY9) E1
	   (ALA10)   (ARG18) E2
	   (LEU27)   (ASP43) H3
	   (VAL48)   (LYS52) E4
	   (ILE65)   (ASN71) H5
	   (ASP74)   (PHE95) H6
	   (PRO98)  (GLU104) E7
	  (GLY105)  (GLY109) E8
	  (GLY109)  (ALA117) H9
	  (ASP119)  (PRO125) E10
	  (ALA126)  (GLY130) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      160.3°   E2                                                                    
H3      -12.5°  169.5°   H3                                                             
E4      144.2°  -16.5°  155.5°   E4                                                      
H5     -140.0°   59.2° -127.8°  -75.6°   H5                                               
H6       15.6° -154.9°   24.2° -139.2° -141.8°   H6                                        
E7      122.6°  -38.5°  134.7°  -22.1°  -97.4° -117.3°   E7                                 
E8     -123.1°   76.7° -111.8°   92.6°   19.6° -122.4°  113.2°   E8                          
H9      -23.2°  176.2°  -14.2° -166.1°  117.7°  -26.9° -144.0° -100.0°   H9                   
E10     104.7°  -56.5°  116.9°  -40.0° -115.3°   99.7°  -18.0° -130.3°  126.2°   E10           
E11    -123.5°   76.1° -112.9°   91.6°   22.1° -121.1°  111.3°   -5.6° -100.3° -127.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3hp0a_ :    (LYS10)  (GLU137)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d2q2xa_ :    (GLN19)  (ASN140)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Lyngbya majuscula [TaxId: 276768]
 d1sg4a1 :     (LEU6)  (LEU134)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d3myba_ :     (LEU6)  (VAL133)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d1pixa2 :    (ALA93)  (ALA214)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Glutaconyl-CoA decarboxylase A subunit |Acidaminococcus fermentans [TaxId: 905]
 d4wcza_ :     (LEU3)  (GLY130)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
 d2q34a_ :    (GLN19)  (ASN140)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Lyngbya majuscula [TaxId: 276768]
 d3kqfb_ :     (ASN6)  (GLY133)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d2q35a_ :    (GLN19)  (ASN140)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Lyngbya majuscula [TaxId: 276768]
 d4wczc_ :     (LEU3)  (GLY130)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14