Protein Concepts Dictionary

Tableau information

Concept source:  d1vphc_  amino acid (a.a.) range (HIS0)(ILE134)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHHHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (HIS0)   (SER11) E1
	   (PHE16)   (THR22) E2
	   (THR22)   (SER32) H3
	   (GLY37)   (HIS45) E4
	   (THR47)   (ALA52) E5
	   (GLU56)   (GLU72) H6
	   (TRP77)   (ASP83) H7
	   (ASN85)   (LEU95) H8
	   (ARG99)  (GLU105) E9
	  (ILE116)  (ASP122) E10
	  (ARG128)  (ILE134) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      138.4°   E2                                                                    
H3      151.2°  -34.4°   H3                                                             
E4      -37.0°  155.2°  131.7°   E4                                                      
E5      119.0°  -42.3°  -72.6°  154.8°   E5                                               
H6      -84.6°  134.6°  102.1°  -51.0°  141.1°   H6                                        
H7      -68.1°   92.6°   83.5°  -62.7° -123.5°  -93.2°   H7                                 
H8      153.7°  -35.1°  -46.7° -164.8°   35.3°  113.9°  125.9°   H8                          
E9      129.2°  -10.7°  -44.9°  154.6°   35.7°  145.2°  -93.1°   39.0°   E9                   
E10     -44.9°  159.0°  129.1°   -9.7°  158.0°  -41.5°  -69.1° -155.1° -162.2°   E10           
E11     160.9°  -28.8°  -35.9°  162.1°  -42.3°  113.0°  116.0°  -10.8°  -35.4°  153.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1vphc_ :     (HIS0)  (ILE134)   [view usage] : d.273.1.1 |YjbQ-like |YjbQ-like |YjbQ-like |Hypothetical protein SSO2532 |Sulfolobus solfataricus [TaxId: 2287]
 d1ve0a_ :     (MSE1)  (SER131)   [view usage] : d.273.1.0 |YjbQ-like |YjbQ-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
 d1vphf_ :     (HIS0)  (ILE134)   [view usage] : d.273.1.1 |YjbQ-like |YjbQ-like |YjbQ-like |Hypothetical protein SSO2532 |Sulfolobus solfataricus [TaxId: 2287]
 d1vmja_ :     (MET1)  (GLY138)   [view usage] : d.273.1.1 |YjbQ-like |YjbQ-like |YjbQ-like |Hypothetical protein TM0723 |Thermotoga maritima [TaxId: 2336]
 d2p6ha_ :     (MET1)  (GLY133)   [view usage] : d.273.1.0 |YjbQ-like |YjbQ-like |automated matches |automated matches |Aeropyrum pernix [TaxId: 56636]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.273