Protein Concepts Dictionary

Tableau information

Concept source:  d3qzla_  amino acid (a.a.) range (ALA64)(PHE176)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA64)   (PRO68) E1
	   (ILE69)   (ALA75) E2
	   (SER82)   (MET88) H3
	   (PRO91)   (GLN97) E4
	   (ASN99)  (ASN109) E5
	  (ASN109)  (LYS114) H6
	  (LYS114)  (ASN120) E7
	  (GLN124)  (VAL130) E8
	  (ASP138)  (ASN143) E9
	  (LYS151)  (PRO162) E10
	  (ASN165)  (PHE176) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      -61.2°   E2                                                                    
H3     -118.9°  142.7°   H3                                                             
E4      160.7°  118.5°   73.9°   E4                                                      
E5      -52.6°  -57.6°   91.7°  145.6°   E5                                               
H6       99.2°   48.5° -140.3°  -72.7°  104.2°   H6                                        
E7       93.6°  109.7° -107.5°  -67.9°  146.2°   78.7°   E7                                 
E8     -102.9° -114.0°   29.5°   94.7°  -63.3° -136.2°  136.0°   E8                          
E9      116.2°  112.4° -100.6°  -44.8°  166.9°   69.0°  -23.9°  129.5°   E9                   
E10     -82.2°  -61.1°   81.7°  115.2°  -30.6°   93.8°  170.8°  -53.1°  155.9°   E10           
E11      96.8°  132.5°  -84.5°  -68.9°  142.0° -102.6°  -24.9°  111.7°  -36.8°  163.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2o1aa1 :    (GLN17)  (GLU131)   [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |Iron-regulated surface determinant protein A, IsdA |Staphylococcus aureus [TaxId: 1280]
 d3qzma_ :    (SER62)  (PHE176)   [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |automated matches |Staphylococcus aureus [TaxId: 158879]
 d2itfd_ :    (GLN63)  (PHE176)   [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |Iron-regulated surface determinant protein A, IsdA |Staphylococcus aureus [TaxId: 1280]
 d3qzla_ :    (ALA64)  (PHE176)   [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3qzoa_ :    (ALA64)  (PHE176)   [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3qzpb_ :    (HIS60)  (PHE176)   [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3qzod_ :    (ALA64)  (PHE176)   [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |automated matches |Staphylococcus aureus [TaxId: 158879]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1