Protein Concepts Dictionary

Tableau information

Concept source:  d2w0da_  amino acid (a.a.) range (ILE114)(TYR262)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEHEEEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE114)  (ILE118) E1
	  (ASN119)  (ASP124) E2
	  (ARG127)  (THR145) H3
	  (PRO146)  (LYS151) E4
	  (ASP158)  (PHE163) E5
	  (LEU181)  (PHE185) E6
	  (SER189)  (ASP194) H7
	  (ASP194)  (ASP198) E8
	  (PHE213)  (GLY225) H9
	  (ALA234)  (PHE237) H10
	  (SER251)  (TYR262) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      -49.6°   E2                                                                    
H3      162.3°  117.3°   H3                                                             
E4      -28.7°  -76.1°  166.4°   E4                                                      
E5      -23.6°   28.2°  139.9°  -52.3°   E5                                               
E6      142.0° -168.0°  -50.7°  115.9°  161.4°   E6                                        
H7      -68.6°  -20.8°  101.1°  -92.4°  -48.7° -149.1°   H7                                 
E8      -30.2°   22.9°  133.4°  -58.8°   -6.6°  164.7°  -43.7°   E8                          
H9      137.1°  154.2°  -48.1°  118.9°  146.1°  -20.3°  147.4°  146.4°   H9                   
H10      12.2°   52.1° -152.9°   34.5°   24.0° -138.1°   72.6°   29.8° -128.3°   H10           
H11     122.2° -171.5°  -71.1°   95.4°  144.5°   20.5° -164.3°  150.3°   32.2° -120.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2wo8a_ :   (ILE114)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d2tcla_ :    (LEU14)  (TYR160)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Fibroblast collagenase (MMP-1) |Human (Homo sapiens) [TaxId: 9606]
 d1qiaa_ :    (THR95)  (TYR246)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]
 d1hfca_ :   (LEU114)  (TYR260)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Fibroblast collagenase (MMP-1) |Human (Homo sapiens) [TaxId: 9606]
 d2clta2 :    (LEU95)  (TYR241)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d966ca_ :   (LEU114)  (TYR260)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Fibroblast collagenase (MMP-1) |Human (Homo sapiens) [TaxId: 9606]
 d2w0da_ :   (ILE114)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1su3a3 :   (LEU114)  (TYR260)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Fibroblast collagenase (MMP-1) |Human (Homo sapiens) [TaxId: 9606]
 d2wo9a_ :   (ILE114)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d1b3da_ :    (LEU97)  (PHE232)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.92