Protein Concepts Dictionary

Tableau information

Concept source:  d1qnga_  amino acid (a.a.) range (SER5)(ILE165)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEHEEEEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER5)   (ASP14) E1
	   (GLY19)   (LEU25) E2
	   (PRO31)   (GLY43) H3
	   (HIS61)   (PRO65) E4
	   (PHE67)   (ASP73) E5
	  (LEU105)  (ALA110) E6
	  (SER117)  (LEU123) E7
	  (CYS126)  (LYS132) H8
	  (LYS132)  (GLU141) E9
	  (MET143)  (GLY153) H10
	  (ARG161)  (ILE165) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      152.2°   E2                                                                    
H3       50.4° -147.7°   H3                                                             
E4      -87.1°   92.8° -116.2°   E4                                                      
E5       98.1°  -84.8°   64.6° -173.0°   E5                                               
E6       73.6°  -81.7°   96.3°  116.6°  -69.6°   E6                                        
E7      -76.5°  108.1°  -99.9°  -16.5°  162.0°  123.7°   E7                                 
H8      132.4°  -44.6°  104.2° -137.0°   40.2°   70.3° -150.6°   H8                          
E9      -79.0°  128.0°  -53.4°  -76.5°   99.8° -148.5°  -62.5° -121.1°   E9                   
H10      41.9° -110.6°   82.0°  -95.4°   91.6°   34.8°  -95.3°  104.5°  120.9°   H10           
E11     152.1°  -50.9° -101.9°  112.2°  -61.3° -111.7°  116.9°  -41.5°   86.0° -145.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2he9a_ :     (SER6)  (VAL175)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qnha_ :     (LYS3)  (ILE165)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d3bt8a_ :    (THR26)  (GLU186)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Leishmania donovani [TaxId: 5661]
 d1ista_ :     (SER2)  (VAL156)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Baker's yeast (Saccharomyces cerevisiae), variant A [TaxId: 4932]
 d4frua_ :    (THR10)  (ILE166)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Horse (Equus caballus) [TaxId: 9796]
 d1cyna_ :    (THR11)  (SER157)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), variant B [TaxId: 9606]
 d2a2nc_ :   (ASP492)  (LYS646)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Peptidylprolyl isomerase domain and WD repeat-containing protein 1, PPWD1, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1h0pa_ :    (THR27)  (PRO173)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Caenorhabditis elegans, isoform 5 [TaxId: 6239]
 d1c5fi_ :     (ARG6)  (ILE170)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Nematode (Brugia malayi) [TaxId: 6279]
 d1a58a_ :     (ARG7)  (GLU175)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Nematode (Brugia malayi) [TaxId: 6279]
 d1qnhb_ :     (SER5)  (ILE165)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d2wfja_ :     (ARG7)  (GLU176)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qnga_ :     (SER5)  (ILE165)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d2gw2a_ :     (ARG7)  (GLU176)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2a2na1 :   (ASP492)  (LYS646)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Peptidylprolyl isomerase domain and WD repeat-containing protein 1, PPWD1, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d4frva_ :    (THR10)  (ILE166)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Horse (Equus caballus) [TaxId: 9796]
 d1a33a_ :     (ARG7)  (ILE170)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Nematode (Brugia malayi) [TaxId: 6279]
 d2rmca_ :    (THR37)  (VAL194)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Mouse (Mus musculus), variant C [TaxId: 10090]
 d1c5fg_ :     (ARG6)  (GLU175)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Nematode (Brugia malayi) [TaxId: 6279]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.62