Protein Concepts Dictionary

Tableau information

Concept source:  d1f46a_  amino acid (a.a.) range (LYS7)(ALA144)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEHEEEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS7)   (ALA16) E1
	   (GLY20)   (GLY25) E2
	   (GLY25)   (ALA35) H3
	   (ALA35)   (GLY40) E4
	   (ILE44)   (LEU49) E5
	   (LEU58)   (ASN63) E6
	   (ASP76)   (PRO80) E7
	   (GLY81)   (GLN87) E8
	   (GLU94)  (VAL112) H9
	  (GLY113)  (ASP118) E10
	  (THR125)  (ALA144) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2       98.7°   E2                                                                    
H3      133.9°  -60.4°   H3                                                             
E4     -112.1°  -71.1°  -99.7°   E4                                                      
E5      111.2°   65.2°   24.1°  121.5°   E5                                               
E6      -46.2° -118.6° -179.0°  -79.5°  156.4°   E6                                        
E7     -124.6°  132.1°   74.0°  105.1°  -79.5°  106.8°   E7                                 
E8      161.7°   70.9°  -27.8°   79.5°  -51.0°  152.0°   61.7°   E8                          
H9      -13.8°  102.7°  147.1° -100.6°  125.0°  -32.9° -124.3°  173.3°   H9                   
E10     158.1° -103.2°  -59.9°   76.0°  -78.2°  120.4°   35.5°  -35.5°  151.1°   E10           
H11    -155.4°  -59.8°  -48.7°   52.2°  -72.5°  130.6°   79.9°  -28.1°  150.0°   45.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1s1ja_ :     (LYS7)  (ASP141)   [view usage] : d.129.4.1 |TBP-like |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Escherichia coli [TaxId: 562]
 d1f46a_ :     (LYS7)  (ALA144)   [view usage] : d.129.4.1 |TBP-like |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Escherichia coli [TaxId: 562]
 d1s1jb_ :     (LYS7)  (ALA144)   [view usage] : d.129.4.1 |TBP-like |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Escherichia coli [TaxId: 562]
 d1y2fa_ :     (LYS7)  (ALA144)   [view usage] : d.129.4.1 |TBP-like |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |automated matches |Escherichia coli [TaxId: 562]
 d1y2ga_ :     (GLU8)  (ALA142)   [view usage] : d.129.4.1 |TBP-like |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |automated matches |Escherichia coli [TaxId: 562]
 d1s1sb_ :     (LYS7)  (ASN143)   [view usage] : d.129.4.1 |TBP-like |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Escherichia coli [TaxId: 562]
 d1f7wa_ :     (LYS7)  (ALA144)   [view usage] : d.129.4.1 |TBP-like |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Escherichia coli [TaxId: 562]
 d1f46b_ :     (LYS7)  (ASN143)   [view usage] : d.129.4.1 |TBP-like |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Escherichia coli [TaxId: 562]
 d1f47b_ :     (LYS7)  (ALA144)   [view usage] : d.129.4.1 |TBP-like |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |Escherichia coli [TaxId: 562]
 d1y2gb_ :     (GLU8)  (ALA144)   [view usage] : d.129.4.1 |TBP-like |Cell-division protein ZipA, C-terminal domain |Cell-division protein ZipA, C-terminal domain |automated matches |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.129