Protein Concepts Dictionary

Tableau information

Concept source:  d4qn2a_  amino acid (a.a.) range (GLY127)(ALA246)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEHHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY127)  (SER133) E1
	  (ASP137)  (PRO146) E2
	  (VAL150)  (TRP156) E3
	  (TYR158)  (LYS166) H4
	  (ALA168)  (GLY174) H5
	  (VAL178)  (SER182) E6
	  (THR188)  (GLY200) H7
	  (THR205)  (LEU210) E8
	  (GLY213)  (SER221) H9
	  (ASP227)  (GLY233) E10
	  (ILE235)  (ALA246) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      157.6°   E2                                                                    
E3      129.6°  -37.3°   E3                                                             
H4      -37.5° -159.7°  162.6°   H4                                                      
H5      -60.8° -137.7° -163.7°   23.3°   H5                                               
E6      120.5°  -41.9°  -13.4°  157.7° -176.9°   E6                                        
H7      -76.3° -125.3°  142.5°  -40.4°  -21.2°  155.8°   H7                                 
E8      123.4°  -34.2°  -34.6°  153.4°  156.2°  -26.2° -157.5°   E8                          
H9      -32.1°  168.8° -152.1°   10.5°   31.2° -149.0°   44.2° -154.6°   H9                   
E10     123.6°  -44.0°   -6.7°  155.9°  163.2°  -13.7°  142.9°  -38.5° -145.5°   E10           
H11     -55.1°  131.9°  164.6°  -30.6°  -29.0°  154.2°  -49.0°  130.1°  -40.8°  167.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3k2wh_ :   (ILE126)  (MET249)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudoalteromonas atlantica [TaxId: 342610]
 d4u3wa_ :   (GLU133)  (VAL253)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d1a4sa_ :   (LEU136)  (ALA254)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Baltic cod (Gadus callarias) [TaxId: 8053]
 d3k2we_ :   (ILE126)  (MET249)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudoalteromonas atlantica [TaxId: 342610]
 d3k2wb_ :   (ILE126)  (MET249)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudoalteromonas atlantica [TaxId: 342610]
 d4qn2a_ :   (GLY127)  (ALA246)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d1kaea_ :   (PRO105)  (ARG224)   [view usage] : c.82.1.2 |ALDH-like |ALDH-like |L-histidinol dehydrogenase HisD |L-histidinol dehydrogenase HisD |Escherichia coli [TaxId: 562]
 d4qn2b_ :   (GLY127)  (ALA246)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82