Protein Concepts Dictionary

Tableau information

Concept source:  d3o1ba1  amino acid (a.a.) range (PHE82)(THR221)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEHHEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PHE82)   (GLY88) E1
	   (ASN91)  (GLY101) E2
	  (HIS103)  (ARG113) E3
	  (PRO115)  (GLY121) H4
	  (THR122)  (PRO143) H5
	  (PRO151)  (SER157) E6
	  (PRO159)  (LYS163) E7
	  (ASN166)  (ARG172) E8
	  (VAL187)  (ASN199) H9
	  (PRO201)  (ALA206) E10
	  (ASP210)  (THR221) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      152.3°   E2                                                                    
E3      -42.6°  164.9°   E3                                                             
H4      -84.4°   93.3°   91.6°   H4                                                      
H5      141.4°  -41.5°  128.5° -132.6°   H5                                               
E6      -18.8°  133.7°  -61.3°  -80.4°  137.2°   E6                                        
E7      143.0°  -45.9°  127.5°   58.8°  -75.4° -136.9°   E7                                 
E8       -1.6°  151.8°  -43.2°  -82.8°  142.8°   18.1°  141.4°   E8                          
H9      120.2°  -82.9°   82.7°  127.5°  -51.3°  136.3°  -84.0°  121.5°   H9                   
E10     -62.6°   92.7° -102.1°  -58.6°  121.9°  -45.1°  -97.2°   61.4°  172.5°   E10           
H11    -141.2°   26.0° -148.3°  118.8°  -21.4° -128.2°   69.6° -141.9°  -72.1°  101.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3o80a1 :    (PHE82)  (ASP222)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
 d3o6wb1 :    (PHE82)  (THR221)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
 d3o1wa1 :    (PHE82)  (THR221)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
 d4jaxa1 :    (PHE82)  (THR221)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Kluyveromyces lactis [TaxId: 284590]
 d3o6wa1 :    (PHE82)  (THR221)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
 d3o08b1 :    (PHE82)  (THR221)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
 d1ig8a1 :    (PHE82)  (ASP223)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Hexokinase |Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
 d3o1ba1 :    (PHE82)  (THR221)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
 d3o5bb1 :    (PHE82)  (THR221)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
 d3o08a1 :    (PHE82)  (THR221)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Milk yeast (Kluyveromyces lactis) [TaxId: 28985]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55