Protein Concepts Dictionary

Tableau information

Concept source:  d4u2ba_  amino acid (a.a.) range (GLY5)(TYR145)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLY5)   (TYR11) E1
	   (HIS14)   (LYS25) E2
	   (PRO29)   (GLN35) E3
	   (ALA42)   (GLY55) H4
	   (TYR56)   (ASP62) E5
	   (ASP62)   (GLN67) H6
	   (GLU78)   (PHE91) H7
	   (MET93)  (GLN110) H8
	  (VAL117)  (SER123) E9
	  (SER123)  (GLY136) H10
	  (ASP139)  (TYR145) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      120.3°   E2                                                                    
E3      -83.1°  135.4°   E3                                                             
H4       94.6°  -35.4°  165.1°   H4                                                      
E5      -73.3°  163.3°  -30.9°  160.8°   E5                                               
H6      -68.8°  170.8°  -42.9° -148.9°   12.1°   H6                                        
H7      -30.6° -110.4° -107.0°  -76.3°   86.1°   76.7°   H7                                 
H8      121.1°  -38.5°  155.4°  -32.2°  145.4°  137.4°   94.7°   H8                          
E9      -91.1°  116.0°  -19.9°  146.5°  -50.8°  -62.8° -119.7°  145.3°   E9                   
H10      49.9°  -88.1°  130.5°  -53.2°  108.6°   98.0°   23.6°  -72.1° -141.0°   H10           
E11     -98.8°  107.2°  -28.2°  139.5°  -58.7°  -70.9° -128.2°  136.2°   -9.3° -148.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1zi8a_ :     (GLY5)  (TYR145)   [view usage] : c.69.1.9 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Dienelactone hydrolase |automated matches |Pseudomonas putida [TaxId: 303]
 d1zica_ :     (GLY5)  (TYR145)   [view usage] : c.69.1.9 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Dienelactone hydrolase |automated matches |Pseudomonas putida [TaxId: 303]
 d1zi6a_ :     (GLY5)  (TYR145)   [view usage] : c.69.1.9 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Dienelactone hydrolase |automated matches |Pseudomonas putida [TaxId: 303]
 d1zixa_ :     (GLY5)  (TYR145)   [view usage] : c.69.1.9 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Dienelactone hydrolase |automated matches |Pseudomonas putida [TaxId: 303]
 d1zi9a_ :     (GLY5)  (TYR145)   [view usage] : c.69.1.9 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Dienelactone hydrolase |automated matches |Pseudomonas putida [TaxId: 303]
 d4u2ga_ :     (GLY5)  (CYS145)   [view usage] : c.69.1.9 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Dienelactone hydrolase |automated matches |Pseudomonas sp. [TaxId: 65741]
 d4u2da_ :     (GLY5)  (CYS145)   [view usage] : c.69.1.9 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Dienelactone hydrolase |automated matches |Pseudomonas sp. [TaxId: 65741]
 d4u2ba_ :     (GLY5)  (TYR145)   [view usage] : c.69.1.9 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Dienelactone hydrolase |automated matches |Pseudomonas sp. [TaxId: 65741]
 d4u2fa_ :     (GLY5)  (CYS145)   [view usage] : c.69.1.9 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Dienelactone hydrolase |automated matches |Pseudomonas sp. [TaxId: 65741]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69