Tableau information
Concept source: d2yp6a_ amino acid (a.a.) range (LYS47)(MET184)
nSSEs in this Concept: 11
String of secondary struct.elems. (SSEs) defining this concept: EEEHEHEHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS47) (THR53) E1
(LYS60) (LEU64) E2
(LYS71) (TRP77) E3
(CYS81) (LYS97) H4
(GLU103) (ALA109) E5
(THR117) (GLY129) H6
(PRO134) (LYS140) E7
(THR142) (GLN148) H8
(PRO153) (ASP159) E9
(GLY165) (PHE169) E10
(SER173) (MET184) H11
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -161.2° E2
E3 67.3° -113.1° E3
H4 -92.5° 91.1° -154.5° H4
E5 66.4° -106.0° -23.6° -157.0° E5
H6 -111.2° 86.9° 107.9° -63.7° 131.1° H6
E7 82.8° -82.3° -57.3° 138.4° -34.6° 155.2° E7
H8 173.6° 13.0° -110.9° 90.8° -109.3° 75.2° -91.1° H8
E9 -108.8° 65.9° 165.9° 34.0° 142.4° -86.1° 109.3° 71.4° E9
E10 76.0° -110.6° -19.1° 144.5° -42.2° 89.0° -74.2° -104.2° 174.1° E10
H11 -109.4° 57.3° 140.0° -59.8° 116.8° -109.9° 82.8° 67.8° -26.7° 155.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3gl3c_ : (ASP33) (LEU167) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Chlorobium tepidum [TaxId: 194439]
d4hqsa_ : (ALA53) (LEU187) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d3p7xb_ : (PHE23) (ILE164) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d1st9a_ : (SER39) (ILE171) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thiol-disulfide oxidoreductase ResA |Bacillus subtilis [TaxId: 1423]
d4hqzb_ : (LYS47) (MET184) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d3gl3d_ : (ASP33) (LEU167) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Chlorobium tepidum [TaxId: 194439]
d1psqa_ : (ASP20) (LEU163) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Probable thiol peroxidase PsaD |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1su9b_ : (SER39) (ILE171) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thiol-disulfide oxidoreductase ResA |Bacillus subtilis [TaxId: 1423]
d3gl3b_ : (ASP33) (GLY168) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Chlorobium tepidum [TaxId: 194439]
d3gl3a_ : (ASP33) (GLY168) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Chlorobium tepidum [TaxId: 194439]
d2yp6a_ : (LYS47) (MET184) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d3hdca_ : (ALA37) (SER167) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.47